Clostridium botulinum A2: CLM_2716
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Entry
CLM_2716 CDS
T00883
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit, Gram-positive type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
cby
Clostridium botulinum A2
Pathway
cby03030
DNA replication
cby03430
Mismatch repair
cby03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLM_2716 (polC)
03430 Mismatch repair
CLM_2716 (polC)
03440 Homologous recombination
CLM_2716 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cby03032
]
CLM_2716 (polC)
03400 DNA repair and recombination proteins [BR:
cby03400
]
CLM_2716 (polC)
Enzymes [BR:
cby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLM_2716 (polC)
DNA replication proteins [BR:
cby03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLM_2716 (polC)
DNA repair and recombination proteins [BR:
cby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLM_2716 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
HHH_6
Rv2179c-like
tRNA_anti-codon
RNase_H_2
DEDDh_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ACO83923
UniProt:
C1FS64
LinkDB
All DBs
Position
complement(2727878..2732176)
Genome browser
AA seq
1432 aa
AA seq
DB search
MENTSVGDLQKEINKERFDTDKEIKIVRVQYFRKKNKLRIILKSIGNFTKEKEDHIKNIL
KKRFSMVEDFEIICYKDLSNITLEELSKKYWVDIVNLASSSVPIARDCLLKSKREVLEDS
INITYNNEFLCRFLSKNKFEGKLKSYIRDIFGIKCNIKLEYDKSFNEEDYFKTIETMEKS
MIKNVLSEIKSKEKKVIRKENSPKTREEENKDTSVILGRSIKEDSIFMKDLNENSGIVVV
CGDVFKKEVIETKTGRKIVTFFITDYTNSMTVKLFPRPRDADRIIEEIKEGIYCKVRGEV
VNDPYARECVIMAKDIVKTTKIEKMDIAEEKRVELHMHSQMSAMDGMTPVSELVKRAAKW
GHKAVAITDHGVVQAYPDAMSAAKKSNIKVIYGIEAYLVDDGVPIVSKAGDKTIEDTFVV
FDLETTGFSSKNDKIIEIGAVKIEKGKIVDRFSEFVNPERSIPDKITELTSITDDMVDDK
EAIDKILPRFIEFIGNSVVVAHNAAFDVSFINKNCKDLKIEFKNSVMDTVTLSRFLFPEL
KRYKLNVIAKHLGISLENHHRAVDDAKATADILLKAFEMLKEKEIITLHNLNKEFLGNIN
IKKEPTYHLIILAKNAVGLKNLYKLVSKSNLEYFFKRPRMAKSLINEYKEGLIIGSACEA
GQIYKEILKGKTKEELKNMIDFYDYLEIQPLGNNEFLVRNGSVKDEKELEEINKKICELG
EFYNKPVVATCDVHFLDEEHEVFRRILMSGQGFSDADNQPPLYFRTTEEMLKEFEYLGEE
KAKEVVIYNTNKIADMIDEIKPIPEETFPPKIEGAEEDIRRMTIEKAHAIYGDPLPEIVE
KRLTKELNSIINNGYAVLYLIAHKLVAKSYEDGYLVGSRGSVGSSFAATMSDITEVNGLP
PHYVCPKCKYSEFFTDGSVGSGADLEDKDCPNCGTKLIKDGHDIPFETFLGFEGDKEPDI
DLNFSGEYQGVVHKYTEVLFGKGHVFKAGTIGTIAEKTAYGFVKKYLDEKNIKANNAEIE
RLSKGCTGVKRTSGQHPGGIMVVPADNEIFNFTPIQHPADDTESDVITTHFDYHSISGRL
LKLDILGHDDPTVLRMLQDLTQVDPKSVPLGDPKVISLFTSPKALGVTEEDIDCPVGTYG
LPEFGTKFVRQMLLDTKPKSFAELVRISGLSHGTDVWLNNAQYFIKEGYTTIKDCISTRD
DIMVYLLQKELPPKSAFTIMEKVRKGKGLTEEQEALMKEHDVPDWYIESCKKIKYMFPKG
HAVAYVMMAMRIAYFKVYYPRAYYATYFSVRADDFDADLIVKGEEKIKEKMNELYAMGNN
ITQKDKGLLTILEISYEMYKRGIKFLKVDLYKSNATKFLIEGDSIRPPLSALQGVGKNAA
KSIEEARLEGEFISKEDLRLRTKVTKTVIETLENHGCLRGMQETNQISLFSL
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggagaatacttcagttggtgatttacaaaaggaaataaataaagaaaggtttgataca
gataaagaaataaaaatagtaagagttcagtattttagaaaaaaaaataaactaagaata
atactaaaatccattggtaattttactaaagaaaaagaagaccatataaaaaatatatta
aagaagagattttctatggtggaggattttgaaataatctgctataaagatctatcaaat
attaccctagaggaactttcaaaaaaatattgggtagatatagtgaatttagcttcttct
tctgtacctattgcaagggattgtcttttaaaatctaaaagagaagtgctagaagatagt
ataaatataacctataataatgaatttttatgtaggtttctttcaaaaaataaatttgaa
ggcaaactgaaatcctatataagagatatatttggaataaaatgcaatataaaattagaa
tatgataaatcttttaatgaagaagattattttaaaactatagaaactatggaaaagtct
atgataaagaatgttttgagtgagattaagtctaaagaaaagaaagtcattagaaaagaa
aattctccaaagactagggaagaggagaataaggatacttctgtcatattaggaagaagt
ataaaagaagatagtatattcatgaaggatttaaatgaaaattctggtatagtagtggta
tgtggagatgtatttaaaaaagaagttatagaaacaaagactgggagaaaaatagtaact
tttttcataacagattacaccaattctatgacagttaaacttttcccaaggcctagagat
gcagatagaataatagaggaaataaaagaggggatttattgcaaagttagaggagaagta
gtaaatgacccttacgcaagagaatgcgtaataatggctaaggatatagtaaaaactaca
aaaatagaaaaaatggatatagcagaggaaaaaagagtagaacttcatatgcatagtcaa
atgagtgccatggatggaatgactccggtatcagaattagtgaaaagagctgctaaatgg
gggcataaagcagtggctattacagatcatggtgtagttcaggcttatccagatgcaatg
tctgcagctaaaaaaagtaatataaaagttatatacggaatagaagcttatcttgtagat
gatggagtacctattgtatctaaagcaggggataaaaccatagaggatacttttgtagtt
tttgatttagaaactacaggcttttccagcaaaaatgataaaataatagaaataggtgca
gtaaagatagaaaagggaaaaatagtagataggtttagtgaatttgtaaatccagaaagg
agcataccagacaaaataacagaacttacaagcataacagatgatatggtagatgataaa
gaagctatagataaaatacttccaagatttatagagtttataggaaactctgtggtggtt
gctcataatgcagcctttgatgtatcttttataaataaaaattgtaaagatctaaaaata
gaatttaaaaatagtgtaatggatactgtaacactaagcagatttttatttcctgaatta
aagagatataaattaaatgttatagcaaagcatttaggcatatccttagagaaccatcat
agagctgtggacgatgctaaagccacagcagatatcttattaaaagcttttgaaatgtta
aaagaaaaagaaataattaccttacataatttaaataaggaatttttaggaaatataaat
ataaaaaaagagcctacctatcatttaataattttggctaaaaatgcagtaggtcttaaa
aatttatataaattagtttctaaatctaatttggagtatttctttaaaagaccaagaatg
gctaaaagtcttataaatgagtataaagaaggacttataataggctctgcctgtgaggcc
ggtcaaatatataaagaaatattaaaagggaaaacaaaagaagaattaaaaaatatgata
gatttttatgattatttagaaatacaacctctagggaataatgaattccttgtaagaaat
ggttccgtaaaagatgagaaagagcttgaagaaataaataaaaaaatatgtgaattaggt
gagttttataataaacccgtagtagctacctgtgatgtgcattttttagatgaagaacat
gaagtatttagaagaatattaatgtcaggtcaaggctttagtgatgcagataatcaacca
ccactttattttagaaccacagaggaaatgcttaaagaatttgaatatttaggagaggaa
aaggctaaagaagtagtaatttataatacaaataagatagcagatatgatagatgaaata
aaaccaattccagaggaaacttttccgcctaagatagagggagcggaagaagatataaga
agaatgactatagaaaaggctcatgctatatatggagatccgcttcctgaaatagtagaa
aaaaggctaacaaaagaattaaattctataataaacaatggttatgctgtactttattta
atagctcataagctagtggccaaatcctatgaagatggatatttagtaggatccagagga
tccgttggatcttcctttgcagctactatgtcagatattacagaagttaatggattacca
cctcattatgtttgtcctaaatgtaaatatagtgaattctttacagatggatctgtaggt
tcaggagcggatttagaggataaggattgtccaaattgcggaactaaactaataaaagat
ggtcatgatataccttttgaaacttttttaggtttcgaaggggataaagaaccagatata
gatttaaatttttcaggagaatatcaaggagtagttcataaatatacagaagttctattt
ggaaaagggcatgtttttaaagcaggaactattggtactatagcagaaaagactgcctat
ggttttgtaaaaaaatatttagatgaaaagaatataaaagctaacaatgcagaaatagaa
agattatctaaaggatgtacaggagttaaaagaacatcaggacagcatccaggaggaatt
atggttgtgcctgcagataatgaaatatttaactttacccctatacaacatccagcagat
gatacagaaagtgatgttataactacccattttgattatcattctataagtggtagactt
ttaaaattagatatattaggtcatgacgaccctacagtacttagaatgcttcaggatttg
actcaggtagatcctaaatctgtacctctaggagatccaaaggttataagtttatttaca
tcaccaaaggctttaggggttacagaggaggatatagattgtcctgtaggaacttatggg
cttccagagtttggaactaaatttgtaagacaaatgttattagatacaaaaccaaaaagt
tttgcagaattggtaagaatatcaggattatcccatggtacagatgtatggcttaataac
gctcagtattttataaaagaggggtatactactataaaggattgtatatctacaagagat
gatataatggtatatttacttcaaaaggaactgccaccgaagagtgcttttacaataatg
gaaaaagtgagaaagggtaaaggccttacagaggaacaggaagctttaatgaaagaacac
gatgtgccagattggtatatagagtcctgtaagaagataaagtatatgttccctaaaggt
catgctgtagcctatgtaatgatggctatgagaatagcttattttaaagtttattatcca
agggcttattatgctacttatttttctgttagagcggatgattttgatgcagatctaata
gtaaagggagaagaaaaaataaaagaaaaaatgaatgaattatatgccatgggcaataat
ataactcaaaaggataaaggtcttttaactatacttgaaatatcttatgaaatgtataaa
aggggtataaagtttttaaaggtagatttatataaatctaatgctactaaatttttaata
gaaggagatagtataagaccacctttaagcgctcttcaaggagtagggaaaaatgcagct
aaaagtatagaagaagctagattagagggcgaatttatatcaaaagaagatttaagatta
agaactaaggttacaaaaactgttatagaaactttagaaaatcatggttgtttaagagga
atgcaggaaactaatcaaatatccttatttagcctttag
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