Clostridium botulinum A2: CLM_3411
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Entry
CLM_3411 CDS
T00883
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cby
Clostridium botulinum A2
Pathway
cby03030
DNA replication
cby03410
Base excision repair
cby03420
Nucleotide excision repair
cby03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLM_3411 (polA)
03410 Base excision repair
CLM_3411 (polA)
03420 Nucleotide excision repair
CLM_3411 (polA)
03440 Homologous recombination
CLM_3411 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cby03032
]
CLM_3411 (polA)
03400 DNA repair and recombination proteins [BR:
cby03400
]
CLM_3411 (polA)
Enzymes [BR:
cby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLM_3411 (polA)
DNA replication proteins [BR:
cby03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CLM_3411 (polA)
DNA repair and recombination proteins [BR:
cby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CLM_3411 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLM_3411 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_2
HHH_5
Imm50
InlK_D3
Ig-like_Pom152_1
Motif
Other DBs
NCBI-ProteinID:
ACO87142
UniProt:
C1FVZ2
LinkDB
All DBs
Position
complement(3440204..3442831)
Genome browser
AA seq
875 aa
AA seq
DB search
MNKERLLILDSNSLLNRAFYALPDLMTGEGIHTNAIYGFVNMLLKMKEEINPDYIVAAFD
RKAPTFRHEEYKDYKAGRKKMPEELAQQFPIVKELLSALAINIFEIDGFEADDLIGTLSV
FAEEKGIEVYIVTGDKDALQLATDNVKVVITKKGITEKEIYDKNRMIEEFGVTPKEFIDV
KGLMGDTSDNIPGVPGIGEKTAFKLIKEYKSIETVLENIENIKGKKLKENLHEYREQAIF
SKKLATIICNVPIDMSLEDIKSKEEYDINKVRKMFERLEFKSLMNKVSKSDEEETVEEEV
SYKNIVSLEEFKDLKNNIIKYKENDLYLYFELEDIVLFSKSRVKTLYANFKDEVYRIDFE
MLLNNTKEQFIEVCREMFESKEIKKITYNAKNPRTILRKLGIDFNGIKFDINLAAYLIDP
VRKEYEISSLASEYLFKNINREDEFLKIKEVNIMPNLYKVLEEKIKDQDMEELLYKVEQP
LTETLSAMETEGFKVDKDILLQLEKKFKGEIESTQLEIYSMSEEKFNINSPKQLGKILFE
KLDLPVIKKTKTGYSTNAEVLDKLRDKHPIIDKITYYRQLTKIYSTYIEGLKAAIDEDGK
IHSNFNQTVTATGRLSSTEPNLQNIPIKYEMGREIRKVFIPNTGDSVILSADYSQIELRV
LAHISDDKNMISAFNEHDDIHTKTASEVFKVPIEEVTPLMRSNAKAVNFGIVYGIGDFSL
SQDLNITRKEAKQYIDAYLERYPNVKLYLENIVEEAVEKGYVSTILNRRRYIKEVKSSNK
IVKAAGERLAMNSPIQGSAADIIKLAMVNVHRKLKEDNFKSSIILQVHDELILNVHKDEL
ERIKALVKKEMEQVLELKVGLDVDINIGNNWYEAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaagattattaatattagatagtaatagtttattaaatagagctttttat
gcattacctgatcttatgactggagagggaattcatactaatgctatatatggttttgtt
aatatgcttttaaaaatgaaagaagagataaacccagattatatagttgcagcttttgat
agaaaggcacctacctttagacatgaagaatataaggactacaaagcaggtagaaaaaag
atgccagaggaacttgcacagcagtttcctatagtaaaagagcttttgtccgcattagcc
ataaatatattcgaaattgatggatttgaagcagacgatctaataggaactttatctgta
tttgcagaggaaaaaggaatagaagtttacatagttacaggagataaagatgccctacaa
ttggctacagataatgtaaaagtagttataactaaaaagggtattacagaaaaagaaatt
tatgataaaaatagaatgatagaagagtttggagttactcctaaagaatttatagatgta
aaaggtcttatgggagacacatctgacaatatacctggagtacctggaataggtgaaaaa
accgcctttaagcttataaaagaatataaaagtatagaaacagtacttgaaaacatagag
aatataaaagggaaaaaattaaaggaaaatttacatgaatatagagaacaggctatattt
agcaaaaaattagctactattatatgtaatgttcctatagatatgagtttagaagatata
aaatcaaaggaagaatatgatataaacaaagttagaaaaatgtttgaaaggttagaattt
aaatctttaatgaataaagtaagcaaaagtgatgaggaagaaactgtagaagaggaagtt
tcttataaaaatatagtttctctagaagaatttaaagatctaaaaaataatataataaaa
tataaagaaaatgatttatatctgtattttgaattagaagatatagttttattttctaaa
tctagagtaaaaacattatatgctaattttaaagatgaagtttatagaatagactttgaa
atgttgctaaataatactaaagaacaatttatagaagtatgcagggaaatgtttgagagt
aaagaaattaaaaaaattacctataatgcaaaaaatccaaggactatactaagaaaatta
ggaatagattttaatggtataaaatttgatataaatttagctgcatacctaatagatcca
gtgaggaaagaatatgagatatctagtttagcttcagaatatttgtttaaaaatataaat
agagaagatgaatttttaaaaataaaagaagttaatataatgcctaatttatataaagtg
ctggaagaaaaaataaaagatcaagatatggaagaattgctatataaggtagaacaacct
cttacagaaacattatcagctatggaaacagaaggttttaaagttgataaagatatactt
ttacagctagagaaaaaatttaaaggggaaatagaaagtactcagctagaaatatattca
atgtctgaagaaaaatttaatataaattctcctaaacagttagggaaaatactctttgaa
aaattagatttacctgttataaagaaaacaaagacaggatattctactaatgcagaggta
ctggataaattaagagataaacatccaataatagataaaataacttattatagacaatta
acaaaaatatactctacttatatagaagggctaaaagctgctatagatgaggatggaaaa
atacattcaaattttaatcaaactgttacagctacagggagattatctagtacagagcct
aatcttcaaaatatacctataaaatatgaaatgggaagagaaataagaaaggtatttatc
cctaatacaggggattctgtaatactttcagcggattattcacaaatagaattaagagta
ttagcacatatatctgatgataaaaatatgataagtgcatttaatgaacatgatgatatt
catactaaaactgcatcagaagtgtttaaagttccaatagaagaagtaacacctcttatg
agaagtaacgctaaagcagttaattttggtatagtttatggtataggagactttagctta
tctcaagatttaaatataactagaaaagaagcaaagcagtatatagatgcttatttggag
agatatcctaatgtaaaactttatttagaaaatatagtagaagaagccgttgaaaaaggg
tatgtaagtactatattaaatagaagaagatatataaaagaggttaagtcttcaaataaa
atagttaaagctgcaggggaaaggctagctatgaatagtccaatccaaggaagtgcagca
gatataataaaattagctatggtaaatgttcatagaaaattaaaagaagataattttaaa
agtagtataatattacaagtacatgatgaattaatattaaatgttcataaagatgaacta
gaaagaatcaaagctttagtaaaaaaagaaatggaacaggttttagaattaaaagttggg
ttagacgtggatataaacataggtaataattggtatgaagcaaagtag
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