Clostridium botulinum A2: CLM_4002
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Entry
CLM_4002 CDS
T00883
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cby
Clostridium botulinum A2
Pathway
cby00470
D-Amino acid metabolism
cby00550
Peptidoglycan biosynthesis
cby01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cby00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CLM_4002 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CLM_4002 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cby01011
]
CLM_4002 (murD)
Enzymes [BR:
cby01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CLM_4002 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cby01011
]
Precursor biosynthesis
Amino acid ligase
CLM_4002 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
DUF6506
QRPTase_C
Motif
Other DBs
NCBI-ProteinID:
ACO85943
UniProt:
C1FNC3
LinkDB
All DBs
Position
complement(4024744..4026120)
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AA seq
458 aa
AA seq
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MKSNFSKFKDFIKYKKVAVVGIGVSNRPLIKFLVKLGAKVTAFDKKHREKLGSISLELEE
IGVDLVLGENYLDKLDGYDVIFKTPSMRIDRPEFVKAKEAGAYITSEMEEFIKYCPAKVF
GITGSDGKTTTTTLVYEMLKKEDYRTWVGGNIGTPLFANIEEMKEDHMVVLELSSFQLMT
MDVSPEISLITNLSPNHLDVHKDFEEYVWAKKNIFKYQSSNNLLVLNKDDDLTNEMENEA
LGDVLKFSLVEKVYNGACLSNNKLTIQGKEVCDSKDIKLKGRHNIANLLAAFCMINKYVS
IDSMKYVATNFSGVEHRCEFIREVNGVKYYNDSIASSPSRTLAGLNSFEKPVILIAGGYD
KKIPFEPLAEGGYDKIKILILMGDTKNKIKSAFEKVISYKKCEMEIVIVNSMEEAVKVAD
NMAEKGDIITLSPACASFDMYPNFEIRGNEFKNIVNRL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaatttttctaagtttaaggattttataaagtataaaaaagtagcagtggta
ggtataggggtaagcaatagacctttaataaaatttttagttaagttaggtgcaaaagta
actgcttttgacaaaaaacatagagaaaaattaggaagtataagtcttgaattagaagag
ataggtgtagatttagtattaggtgaaaattatttagataaattagatggatatgatgtt
atttttaaaactccatctatgagaatagatagaccggaatttgttaaggcaaaagaagct
ggagcttatattacatcagaaatggaagagtttataaaatattgtccagctaaagttttt
ggtataacaggaagtgatggtaaaacaactactacaacattagtgtatgaaatgttaaaa
aaagaagactatagaacttgggtaggggggaatataggaacacctttatttgctaatatt
gaagaaatgaaggaagaccatatggttgtattagaactatcaagttttcagcttatgaca
atggatgtatcaccagagatttctttaatcactaatttaagtcctaatcatttagatgtg
cataaagattttgaggaatatgtatgggctaaaaaaaatatatttaagtatcaatcaagt
aataacttgttagtattaaataaagatgatgatttaacaaatgagatggagaatgaagct
ttaggagatgttttaaagtttagtcttgtagaaaaagtatataatggggcttgcttatca
aataataagcttactatacaaggaaaagaagtatgcgattctaaagatataaagcttaag
ggtaggcataatatagctaatttattagcagctttttgtatgataaataaatatgtatca
atagatagtatgaaatatgtagctacaaatttttcaggtgtagaacatagatgcgaattt
ataagagaagttaatggggttaaatactataatgattcaatagcatcaagccctagtaga
actttagcaggattaaactcttttgaaaagccagtaatattaatagctggtggatatgat
aaaaagataccttttgaacccttggcagaaggtggatatgataaaattaaaatattgata
ttaatgggggatacgaagaataaaataaaatcagcttttgaaaaagtaatctcctataaa
aagtgtgagatggaaatagttatagtaaatagcatggaggaagctgtgaaagtagctgat
aatatggcggaaaagggagatataataactttatcaccagcttgtgctagctttgatatg
tatcctaactttgaaataaggggaaatgaatttaagaatatagtaaataggctataa
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