Clostridium botulinum A2: CLM_4147
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Entry
CLM_4147 CDS
T00883
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
cby
Clostridium botulinum A2
Brite
KEGG Orthology (KO) [BR:
cby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cby03016
]
CLM_4147 (gidA)
03036 Chromosome and associated proteins [BR:
cby03036
]
CLM_4147 (gidA)
Transfer RNA biogenesis [BR:
cby03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
CLM_4147 (gidA)
Prokaryotic type
CLM_4147 (gidA)
Chromosome and associated proteins [BR:
cby03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
CLM_4147 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C
GIDA_C_1st
FAD_oxidored
Pyr_redox_2
DAO
Pyr_redox
Pyr_redox_3
FAD_binding_2
AlaDh_PNT_C
ThiF
HI0933_like
Thi4
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
ACO86151
UniProt:
C1FP30
LinkDB
All DBs
Position
complement(4149508..4151385)
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AA seq
625 aa
AA seq
DB search
MKYLAGDFDVVVIGAGHAGCEAALASARMGCKTLICTMNLDSIALMACNPNIGGTAKGHL
VREIDALGGEMGINIDHTFIQSRMLNTSKGPAVHSLRAQADKKRYSERMKHLLEKEENVV
LRQLEVIEIDVEDNEVKGVLTKNGAYFTTKAIILCTGTYLKGKIIIGDIIYSSGPSGLYP
ANDLSQSLLDLGINLRRFKTGTPARINKRSVDFSKMIEQPGDKKIVPFSFIDNKLDKDQI
SCYLTYTSEETHKIIHENIHRSPLYNGSIEGVGPRYCPSIEDKIVRFPDKDKHQIFIEPE
GENTEELYVGGMSSSLPEDVQIKMYRSVPGLENAEILRTAYAIEYDCIDPQQLDLTLEFK
NINGLYGAGQFNGSSGYEEAAAQGLIAGINAVLKIKEKNPLILKRSDAYIGVLIDDLVTK
GTNEPYRMMTSRAEYRLLLRQDNADLRLTELGYKVGLVKEDRYNKFLNRKKNVENEIERL
RNMQITGKREINEFLLEKGSTELKKPISLYELIKRPELDYFKVEPLDDKRPSLSDDEKEE
INIIAKYEGYINKQLEQVEQFKKYEDRLIPKSINYLDIKGLRLEAIQKLEKIKPINIGQA
SRISGVSPADISVLLIYMERKNREN
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatttagctggagattttgatgtagtagttattggcgcaggtcatgcgggatgc
gaggctgcattagcttctgcaagaatgggatgtaaaacattaatatgtactatgaaccta
gatagtattgctcttatggcttgtaatcctaatataggtggaacagcaaaaggacattta
gtaagagaaatagatgctttaggtggagaaatgggaataaatatagaccatacatttata
caatctagaatgcttaatacttctaagggtccagcagttcattctttaagagctcaagca
gataaaaaaagatatagtgagagaatgaaacatctactagagaaggaagaaaatgttgtt
ttaagacagctagaagttatagaaatagatgtagaggataatgaagttaaaggtgtttta
actaaaaatggagcatattttactacaaaagctataatattatgtactggaacttattta
aagggtaaaataataataggagatataatatatagtagtggaccaagtggtttgtatcct
gctaatgatttatctcaaagtttattagatttgggtataaatcttagaagatttaaaaca
ggaacccctgcaagaataaataaaagatcagtagatttttctaaaatgatagaacaacca
ggagacaaaaaaatagttcctttttcatttattgataataagctagataaagaccagatt
tcttgttatttaacttatacatctgaagaaactcataaaataatacatgaaaatatacat
agatctccattatataatggatcaatagaaggggtaggtccaagatactgcccatctatt
gaagataagattgttagatttccagataaagataagcatcaaatattcatagaaccagaa
ggtgaaaatacagaagaattatatgttggcggtatgtctagttcattaccagaagatgtt
caaataaaaatgtatagaagtgtaccaggtttagaaaatgcagaaatactaagaactgcc
tatgctatagagtatgattgtattgatcctcaacaactagatttaaccttagaattcaaa
aatataaatgggttatatggggcaggtcaatttaatggaagttcaggttatgaggaagct
gcagcacagggacttatagctggaattaatgctgtgttaaaaataaaagaaaaaaaccca
ttaatattgaaaagatcagatgcttatataggtgtacttatagatgatttagtaacaaag
ggcacaaatgagccttatagaatgatgacatcaagagcagaatatagattgctgttaaga
caagataatgcagatttaagattaacagagttaggctataaagtcggacttgtaaaagag
gataggtataataaatttctaaataggaaaaaaaatgtagaaaatgaaatagaaagatta
agaaatatgcaaataacaggaaaaagagaaataaacgaatttttattagagaaagggtct
actgaactaaaaaagcctattagtttatatgaattaataaaaagaccagaattagattat
tttaaagttgaacctttagatgataaaagaccaagtttaagtgatgatgaaaaagaagaa
ataaatataattgcaaaatatgagggatatataaacaaacagttagaacaagttgagcaa
tttaagaagtatgaagatagattaataccgaaaagtattaattatctagatataaaaggg
ttgagattagaggctattcaaaaattggaaaaaataaagcctataaatatagggcaggct
tctagaatttcaggtgtatctccagcagatatatcagtattacttatatatatggaaaga
aaaaatagagaaaactag
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