Clostridium beijerinckii ATCC 35702: Cbs_0013
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Entry
Cbs_0013 CDS
T03415
Name
(GenBank) ATP-dependent nuclease subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cbz
Clostridium beijerinckii ATCC 35702
Brite
KEGG Orthology (KO) [BR:
cbz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbz03400
]
Cbs_0013
Enzymes [BR:
cbz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cbs_0013
DNA repair and recombination proteins [BR:
cbz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Cbs_0013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AIU04156
LinkDB
All DBs
Position
18862..22341
Genome browser
AA seq
1159 aa
AA seq
DB search
MSIRFVYGRSGTGKSKFCIDEIKNNIDKKLDFNKLILLVPEQYTFMTENKILHEIGENAF
FRTEVLSFKKMAHNIFEEYGGRVKEIIKESGRNMLIHRVINENIEFLDYFNRMSREQGFN
EIISEVISEFKKYNISIDSIRAIDEKINDAELYQKVKELMIIYEAFNLKMHENYIDGDDE
LTLLDKKLLESSAYVDSEVWIDEFTSFTPQQLDIIKVLAKRCRRVNITFCIDNKSLNNNS
EDITDVFNIIKSTENKILKIMKENNIAYDKPVNLNNAIPYRFKGNLELDHIEKYFFSYPF
NEYDKNPESITLYKASNIYDEIERVSKSITSLVRENGYRYRDISVVCRNIDDYEKIISVI
FKDYNIPYFLDKKIQLLSNPLIVLISSAFEILLKNWSYESVFKYLKSGLTGIDNSYIDRL
ENFILEYGVKGYKWTSKEIVNEKWFRGNGELTDDKVLIAEIMEEIRYPLMTFHNKVNGKH
KVKDICSAIYEFLVDVKVFDRINEWIKNFEELGLEDKVKEYSQVESIVIDIIDQAVDVIG
EERLEYSEFFRILSSGFANEEIGIIPVALDQVNIGDIARIKGRDVKVLYIVGINDGVLPA
SKKEEGLLSDRDRTTLGEVGINLSSTTRNKVFEEQYLLYMALTISSEYLMLSYPMADFEG
KSLRPSIVISRIKKIFPNLIEESAIYDLKILENKFGKIIAPIPTFNELIISMRKDFDKEY
IEPYWSEVYEWFKNNDEFRDKVKNIFKGLSYSNIGDKVSKNKLRKLYQNDLEKLVFSVSK
LEKYAECPFSYFVQYGLKAKNRKVYEFTPPDLGSFVHEMLDSFTNKVREDGVLWSDLSNE
KCKEIISNLIDKKLMDESNSILNSTKKFKYLAQRFKRVISKSVSVIASQIGKGEFEVFKT
EFDFGSYSSGEAITLDLNDNEKVYLQGRIDRIDKLDLDGETYIRIIDYKTGAKKFDLNEI
YYGLQVQLLVYLDALIKNSKYILDKQVKPGAILYFKIDDPIIKSKKEMTDEEVEKEVLSA
LKMKGLVLKDARVVKAMDKDIEGYSLVIPASFKADGGFKATSDVVTEEEFRILREYVNRK
MIEICEEMLSGDIKIQPTKNSNIAHCEYCDFSSICQFDTEIKDNKYKIIINKSTNDIWNN
IKKEIDNSNKLIKVENEEV
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgagtataagatttgtttatggaagatctggaacaggcaagagtaaattttgcattgac
gagataaaaaataatattgataagaaattagatttcaataagttaattctattagttcca
gaacaatatacatttatgactgaaaataaaatattgcatgaaataggagaaaatgctttt
tttaggacagaggtgctgagttttaaaaaaatggctcataatatttttgaagaatatggt
ggaagagttaaagagattattaaggaatctggaaggaatatgctaattcatagagttata
aatgaaaatattgagtttctggattattttaataggatgtctagagaacaaggatttaat
gaaattatatcagaagtgatttcggaatttaaaaaatataatattagcattgatagtata
agagcaatagatgagaaaataaatgatgctgaattatatcaaaaggttaaagaattgatg
ataatttatgaagcatttaacttgaaaatgcatgaaaattatattgatggagatgatgag
ttaacactactagataaaaagttattagaaagtagcgcgtatgtggattcagaagtctgg
atagatgaatttactagctttacacctcaacaactagatattataaaggtattagccaag
agatgcagaagagttaatataactttttgtattgataacaaatctctaaataacaactct
gaagatataactgatgtattcaatattataaagagtactgaaaataaaatattaaagata
atgaaagaaaacaacatagcttatgacaagccagtcaacttaaataatgcaattccttat
aggtttaaaggtaatctggaacttgatcatatagaaaagtattttttttcttacccattt
aatgaatatgataagaaccctgagagtataacactttacaaagcaagtaatatttatgat
gagatagaaagagtatcaaaaagcattacaagcttggtgagagaaaatggttatagatat
agagatatatctgtagtttgtagaaatatagatgattatgaaaaaataatatcagtaata
tttaaagattataatattccatactttttagataaaaagattcaattactaagtaatcca
ttgattgtacttataagttctgcttttgaaattttgcttaagaattggtcttatgaaagt
gtatttaaatatttaaagagtggcttaactggaatagataattcatatatagataggcta
gagaactttatattagaatatggggtaaagggttataaatggacatcaaaagaaatagta
aatgagaaatggtttagaggaaatggtgaattgacggatgataaagttttaatagctgaa
attatggaagagataagatatccattaatgacttttcataataaagtaaatggaaaacat
aaagttaaagatatatgttcagctatttatgaatttttagtggatgtaaaagtttttgac
agaattaacgaatggattaaaaattttgaagaattaggattagaagataaagttaaggaa
tatagtcaggttgaaagtatagttatagatattatagatcaagcggtcgatgttataggc
gaagagaggttagagtattctgaattttttagaatattaagttctggtttcgccaatgaa
gagataggaattatacctgtagcattagatcaggttaatattggagatatagcaagaata
aagggcagagatgttaaagttctttacatagtaggaattaatgatggagttctaccagca
tccaagaaagaggaaggtttattatctgatagagatagaacaacattaggtgaggttgga
ataaatttatcatcaacaactagaaataaagtttttgaagaacagtatctactatatatg
gcattaacaattagtagtgaatatttaatgctttcatatccaatggctgattttgaaggt
aaatcattaagaccatctatagtaatatctagaattaaaaagatatttcctaatttaatt
gaagaaagtgcaatttatgatttgaaaattcttgaaaataaatttggcaaaattattgca
ccaattccaacatttaatgaacttataatttctatgagaaaagattttgataaggaatat
atagagccttactggtctgaggtatatgaatggtttaaaaacaatgatgagtttagggat
aaagttaaaaatatatttaaggggcttagttactcaaacattggagataaagtttcaaaa
aacaaacttagaaaactttatcagaatgacttagaaaagttagtatttagtgtttcaaag
ttagaaaagtatgcagaatgccctttttcttattttgttcaatatggactaaaagctaaa
aatagaaaggtatatgaatttacaccaccagacttaggatcatttgtacacgaaatgctt
gattcattcactaataaagttagagaagatggagtactatggtctgatttaagcaatgaa
aaatgtaaggagataatatctaaccttattgataagaagttaatggatgaaagtaattct
atattaaatagcactaagaaatttaaatatttagcgcaaagatttaaaagagtaatatct
aaatctgtttcagttattgcaagtcaaataggaaaaggtgaatttgaagtatttaaaact
gaatttgattttggaagttatagctctggagaagctataacattagatttgaatgataat
gaaaaggtgtatcttcaaggaagaattgatagaatagataagttagatttagatggcgaa
acttatataagaattatagattataaaactggagctaaaaaatttgatttaaatgaaata
tattatggattacaagtgcaattattagtctatttagatgcacttataaagaattcaaaa
tatatacttgataaacaagtaaagccaggagcaatattatactttaaaatagatgatcct
ataataaaaagcaagaaagaaatgactgacgaagaagtagagaaggaagtattaagtgct
ttaaagatgaaaggattagtcttaaaagatgcgagggttgtaaaagctatggataaggat
atagaaggatattcattggttataccagcatcatttaaggctgatggaggttttaaggca
accagtgatgttgtaacagaagaggagtttagaatacttagagaatatgtaaataggaag
atgatagagatatgtgaagaaatgctaagtggagatattaaaattcagccgactaagaat
tctaacattgctcattgtgaatactgtgatttttcatcaatatgccaatttgatacagaa
ataaaagacaataaatacaaaattataataaacaaatctacaaatgatatatggaataat
ataaaaaaagaaattgataattctaataaattaattaaggttgaaaatgaggaagtatag
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