Clostridium beijerinckii ATCC 35702: Cbs_0107
Help
Entry
Cbs_0107 CDS
T03415
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cbz
Clostridium beijerinckii ATCC 35702
Pathway
cbz00470
D-Amino acid metabolism
cbz00550
Peptidoglycan biosynthesis
cbz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cbz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Cbs_0107 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Cbs_0107 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbz01011
]
Cbs_0107 (murD)
Enzymes [BR:
cbz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Cbs_0107 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cbz01011
]
Precursor biosynthesis
Amino acid ligase
Cbs_0107 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
PipB2_N
CbiA
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AIU00327
LinkDB
All DBs
Position
139445..140821
Genome browser
AA seq
458 aa
AA seq
DB search
MKKDFNEFKEFIVGKKVGVVGIGVSNIPLINFLIDLGAAVTAFDKKNLEELGDVADGFNK
KGVKLELGEKYLDNLKGFDVIFKTPSMRIDSEALVRARKEGAYVTSEMEEFVRYTRGKVY
GITGSDGKTTTTTIISKLLEGQGYKTWVGGNIGTPLFSEIENIHDEDKVVLELSSFQLMT
MTQEIDVAVCTNLSPNHLDMHKSMQEYIDAKKNIFIYQNSNGLLVVNRENEITHGFIKEA
KGNVKEFSSKRELIDGAYYKNGILYLEDKEVCKKDDIVIKGMHNVENYLAAFLATKDDVS
VEVMKKVAETFAGVEHRCELVREIDGVKYYNDSIASSPTRTLAGLRAFDEKVIVIAGGYD
KNIPFEPLAYEGYPYIKELILMGATKHKIKDVFDNLENEKGIKININMVESLEEAVRLAE
SIANQGDIVTLSPACASFDMYPNFMIRGNKFKEIVKSL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggattttaatgagtttaaagaatttatagtgggtaagaaagttggagttgtt
ggaattggagtaagtaatattccgttaatcaattttttaatagatttaggtgctgctgta
acggcttttgataaaaagaatttagaagaacttggagatgttgcagatggatttaataaa
aagggagttaagctggagcttggagaaaaatatctagataacttaaaagggtttgatgtg
atatttaaaacaccatcaatgaggattgatagtgaagcattagtaagggctagaaaagaa
ggagcatatgttacttctgagatggaagagttcgttaggtatacaagaggaaaagtctat
ggaataaccggtagcgatggaaagacaacaacaacaacaattatttctaagttactagaa
ggtcaagggtataaaacatgggtcggaggaaatataggaactccattattttcagaaata
gaaaacatacatgatgaagataaagttgtattagagttatctagctttcaacttatgaca
atgactcaagaaatagatgttgcagtatgtacaaatttatccccaaatcacttagacatg
cataaaagtatgcaagagtatatagatgcgaaaaagaatatctttatatatcaaaattca
aatggacttttagtagtgaatagggagaacgaaattacccatggatttataaaagaagcg
aaaggaaatgtgaaagagttcagttcaaaaagagaactgatagatggagcatactataaa
aatgggatactctatcttgaagacaaggaagtttgcaaaaaagacgatatcgtaattaag
gggatgcataatgttgaaaattatcttgcagcatttttagcaacaaaagacgatgtctct
gtggaggtaatgaaaaaagttgctgaaacatttgctggcgttgaacataggtgtgaactt
gtaagagagatagacggagttaaatattataatgattctattgcttcaagtcctacaaga
actttagcggggcttagagcatttgatgaaaaagtaatagttattgcaggagggtatgat
aagaatataccttttgaacctttagcatatgaggggtacccatatataaaagaattgatc
cttatgggagcgacaaagcacaagatcaaagatgtttttgataatttagaaaatgaaaaa
ggaattaaaattaatataaatatggttgagtctttggaagaggcagtaagacttgctgaa
agcatagcgaatcaaggcgatattgtcactctatcacctgcttgtgcatcatttgacatg
tatcctaattttatgataagaggtaataagtttaaagagatagtgaagtctttataa
DBGET
integrated database retrieval system
