Clostridium beijerinckii ATCC 35702: Cbs_0180
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Entry
Cbs_0180 CDS
T03415
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cbz
Clostridium beijerinckii ATCC 35702
Pathway
cbz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cbz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cbs_0180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbz03021
]
Cbs_0180
03400 DNA repair and recombination proteins [BR:
cbz03400
]
Cbs_0180
Enzymes [BR:
cbz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cbs_0180
Transcription machinery [BR:
cbz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cbs_0180
DNA repair and recombination proteins [BR:
cbz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cbs_0180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Big_7
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AIU00628
LinkDB
All DBs
Position
206633..207580
Genome browser
AA seq
315 aa
AA seq
DB search
MLEIEKPIIECIEANEDGTYGKYVVEPLERGYGITLGNALRRILLSSLPGVATTSVKIDG
VLHEFSTVQGVKEDVTELILNIKSLALRMNGEGPKVIYIDAKGPGEVTGADIKTDGDVEV
VNKNLHIATLDNDGRLYMELTVNKGRGYVTQNKNKSDELPISAIAVDSIYTPVKRVNFTV
DNTRVGQITDYDKLTLEIWTNGTIKIDEAISLSAKILIEHFKLFMSLTDNTNDVEIMIEK
EDDKKEKVLEMTVEELDLSVRSYNCLKRAGINTVQELATKSMDDMMKVRNLGKKSLEEVE
RKLKELGLALKLTEE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaatcgaaaagccaataatagaatgtatagaagctaatgaagatggtacttat
ggtaagtacgttgttgaaccacttgaaagaggatacggtattacattaggaaatgcccta
agaagaatactattatcatcccttccaggagttgcaacaacctctgtcaaaattgacggt
gtgcttcatgagttttctactgttcaaggagttaaagaagatgttactgaattaattctt
aatatcaaatcattagctctaagaatgaatggtgaaggtccaaaagttatttatattgat
gctaaaggaccaggagaagttactggagcagatataaagactgatggtgatgttgaagtt
gttaataagaatttacatattgcaactttagataacgatggaagactttatatggaattg
acagttaataaaggaagaggatatgttactcagaataaaaataagagtgatgaattacca
atttctgctatagcagttgattctatttatacaccagtaaaaagagttaattttactgtt
gataatacaagagttggtcaaattactgattatgataaattaactttagaaatttggact
aatggtactataaaaatagatgaagctattagtttatcagcaaaaatacttattgaacac
tttaaattattcatgtcattaacagataatactaatgacgttgaaataatgatagaaaaa
gaagacgataagaaagaaaaagtcctagaaatgactgtagaagaacttgatttatcagtt
agatcatataactgtttaaaaagagccggaattaatacagtccaagaacttgctacaaaa
tctatggatgatatgatgaaagtaaggaatctaggaaagaaatctttagaagaagttgaa
agaaagcttaaagaattaggtttagccctaaaactaaccgaggagtaa
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