KEGG   Clostridium beijerinckii ATCC 35702: Cbs_0429
Entry
Cbs_0429          CDS       T03415                                 
Name
(GenBank) RecD/TraA family helicase
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
cbz  Clostridium beijerinckii ATCC 35702
Pathway
cbz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cbz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Cbs_0429
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbz03400]
    Cbs_0429
Enzymes [BR:cbz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Cbs_0429
DNA repair and recombination proteins [BR:cbz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Cbs_0429
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_RecD2 SH3_13 OB_YrrC UvrD_C_2 HHH_5 Viral_helicase1 AAA_11 PIF1 NAT10_TcmA_helicase PhoH AAA_22 DEAD SLFN-g3_helicase AAA nSTAND3 AAA_28 HHH_2 AAA_23 NTPase_1 ATPase_2 DNA_pol_lambd_f AAA_29 AAA_12 HTH_72 NPHP3_N T2SSE SRP54 SMC_N cobW ABC_tran HHH_3 MeaB ABC_ATPase MobB UvrD-helicase TrwB_AAD_bind
Other DBs
NCBI-ProteinID: AIU04346
LinkDB
Position
518230..520458
AA seq 742 aa
MEVLNGFVENIVFKSEDTGYVVCRIRNEKTLISAVGTVPFLREGQNVKLTGYWTVHKQFG
NQFNIQDYEELLPNSLDGIEKYLSAGIIHGIGPVTAKKIIERFGEETLDIMENHIERLME
IEGIGEKKFQIIYESYIEQQGLKDIILYFHKHGVTNNQCVKIYKKFGANARQIVSDNPYI
LCDEISGIGFKTADRIAMSIGIEKNSEFRIQSGIKYVMNQFCSAGNTFMPKNNIIEECEN
NLLISKELIEKNIYDMAAQQKIIVENINGTEVGFLLQYYYCELGVTSKIITLGLQQIQTI
NSDIDFEINVFEKEQNIKFAESQREAIIGAFNNGIEIITGGPGTGKTTIIKAIIHIYENN
GMKVILGAPTGRAAKRMTESTGREAKTIHRLLEMGISEDDESVFEKGESSPLDCDVIIID
EASMIDIILMQNLLKAINLGTRLIIVGDVDQLPSVGPGNVLKDLIESDYIKVVRLKEIFR
QGSESLIVVNAHRINEGQMPLLNQKDRDFFFISEDNQERIANTIMDLINRRLPKFNKSWN
KLKDMQVLTPMRKGVLGVTNLNTKLQEMFNASSKDKKEKTSRDIIFREGDKVMQTKNNYT
LKWIRVSGYGENEGVGVFNGDLGFIESIDEERKTLTIIFDEERKVIYDFNFLDELDLAYA
TTIHKSQGSEFKVVIIPVFMGSPFLMNRNLLYTGITRAKQLVVVVGFQKALMYMINNTNS
IERYSSLRYRIREIITKDEFEE
NT seq 2229 nt   +upstreamnt  +downstreamnt
atggaagttctaaatggatttgttgagaatattgtttttaaaagtgaagatactggttat
gtcgtttgtagaattagaaacgaaaagacattaattagtgctgtaggaacagttcctttc
ttgagagaaggacaaaatgtaaagttaacaggatactggacagtacacaaacaatttggt
aatcaatttaatattcaggattatgaagaacttcttccaaattcattagatggcatagaa
aaatatttaagtgcaggaataatacatggaattggaccagttacggctaagaaaataata
gagagatttggtgaagaaactctagacataatggaaaaccatattgagaggcttatggag
atagagggtataggggaaaagaaatttcaaataatatatgaatcctatatagagcaacaa
ggtttaaaagatataatcttatattttcataaacacggagtcactaataatcagtgtgta
aaaatatataagaaatttggtgcaaatgcgaggcagatagtatctgataatccatatata
ttatgcgatgaaatatcgggaattgggtttaaaacagctgacagaattgctatgagcatt
ggcattgaaaagaattcagagtttagaattcaaagtggcattaaatatgttatgaatcaa
ttttgctctgcaggaaacacatttatgcctaaaaataatataatagaagaatgcgaaaat
aatttgttaatatctaaggaattaattgaaaaaaatatatatgacatggctgcgcaacaa
aaaattattgttgaaaacataaacggtactgaagtcggatttttgcttcaatattattat
tgcgagctaggtgttactagtaaaataataactttaggtttgcagcaaattcagactata
aactcggatattgatttcgaaattaacgtttttgaaaaggaacaaaatataaaatttgca
gaatcacaaagagaagcaattattggcgcatttaataatggtatagaaataattaccggt
gggccaggaacagggaagactacaattataaaggcaataatacatatatatgagaataat
ggaatgaaagtaatacttggggcaccaacaggaagagctgcaaagaggatgactgaatca
acagggagagaagctaaaacaatacatagactattagaaatgggaatttctgaggatgat
gaatcagtatttgaaaaaggagaatcatcgcctctagattgtgatgtaataataattgat
gaggcgtctatgattgacattatcttaatgcagaatctactaaaagcaattaatttagga
actaggttgataattgtgggagatgttgatcaattaccttctgttggaccaggaaatgtg
ctaaaagatcttatagaaagcgattatataaaggtggtaagattaaaagagatatttagg
caaggatcagaaagtttaattgtagtaaatgctcatagaataaatgagggacagatgcct
ttgctaaatcaaaaagatagagattttttctttattagcgaagataatcaagaaagaatt
gcaaatactataatggatctaataaatagaagactccctaagtttaataagtcttggaat
aaactgaaggatatgcaggttttaactcctatgagaaaaggtgtgcttggagtcacaaat
ttaaatacgaagcttcaagaaatgtttaatgcatcatcaaaagataaaaaggaaaagact
tctcgagatataattttcagagaaggtgataaggtaatgcaaacaaaaaacaattataca
ttaaagtggattagggttagtggttatggcgaaaatgaaggagtgggagtttttaatggt
gatctgggattcatagaaagcatcgatgaagaaagaaaaacactcacaatcatatttgat
gaagaaagaaaagttatatatgattttaattttttagatgagttggatttggcttatgct
actacaatacataaaagccaaggaagtgaatttaaggttgtaataattccggtatttatg
ggatcgccatttcttatgaatcgtaatttgctttatacaggtattacgagggcaaaacaa
ttagtagtagttgttgggtttcaaaaagcattaatgtatatgattaataatacaaatagt
atagaaagatactcatctttgagatatagaataagagagataataaccaaagatgaattc
gaagaataa

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