Clostridium beijerinckii ATCC 35702: Cbs_0981
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Entry
Cbs_0981 CDS
T03415
Name
(GenBank) SMC domain-containing protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cbz
Clostridium beijerinckii ATCC 35702
Brite
KEGG Orthology (KO) [BR:
cbz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbz03400
]
Cbs_0981
DNA repair and recombination proteins [BR:
cbz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cbs_0981
Archaeal homologous recombinant proteins
Cbs_0981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
zf-DNL
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AIU03861
LinkDB
All DBs
Position
1172404..1175895
Genome browser
AA seq
1163 aa
AA seq
DB search
MRPIKLRIKGLNSFMDEQIIDFDKLTDRGFFGIFGPTGSGKSTILDGITLALYGNVSRKS
SNFINTNCDRLNVNFEFQISGSEIRKYIIDREFKRKKDGGISSGKCKIVEVTSSEEEILA
DGVKTINKKVEEIVGLNLEDFSRTVVLPQGKFSEFLKLEGKDRRDMLERLFNLQQFGDNL
SRKLSAKISKERTDSNILAGQLSGYSDVSQEKLKEKENALEELKNNLEALKKELDIIEKK
HKENEEIWKLQLDLLYYKNKEQTLKEKEENINSYIEKIKLGEAGAKVLPYLNAFESTRKA
FDKNEIELEELKSKIGKIKEEKEKIEQLWCMAKDKKENKLPQLMMQEQKVKDAIEEKNLI
REIENKIDLLKAQIKECDAKNNNIQSELIKIEEEISNKNKLIKEDEKTYDNLKIEESLKE
AVQEGIIVEEKLEKINGILVKDKQKKAVIEKENSETILKGKALREVLDKEKKSLEDKDKQ
YEFLLKNSPGEQKDLVNLKQLIVENEQKWSSYVKLNKEIDFSREEIKNLQIDILSRREEE
KQLEKELEEIKNTQREVMRENLAHTLRQELKDGDTCPVCGSTHHMKENIRIFEVQDVKNV
EEKIKLKENSIKIISSKITQGETKVNSFNEKIKVNLEEIEKLGTAFNEKPLEELKQEFIN
LEKALESYSKAKEELEKSVNKLRNEINIKTGEINELRAVVRTNQRQLEDLEKSITENTEE
LNILKNRLDSLRAKTLVTDFNKKSEEIKAVEKERERLSEVIKVNRELIEKLEKNKENLTS
EVILAKENLTRYNTELSNYEKSKEEKIQAIKNKVDNTDDLVSLLHKIQENIENINSEFKE
SENNKNKIEKEFNENNERLISAISKYKELSKRKKDEEAQLEVAIDSEGFNSLDDVKKNII
GKEEINDYKLKVESYKSEVSKVNGAIESLLNKIDGKELSEKEYTEIKLLKDIKEKEFNEI
NEDKIKVDEELKNIKNKLEEQKDLLDKKMKLEHKLALLGDLEKLFKGKKFVEFVAVSKLK
YVSVEASKRLKEITHGNYGLEVDDNSRFIIRDYKNGGAKRDSTTLSGGETFLASLSLALA
LSAQIQLKGTAPLELFFLDEGFGTLDDDLLEVVMNSLERIHNEKLKVGIISHVEAIKNRV
PVKLMITPAESGMGGSKVRIERN
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgagaccaatcaaattgaggattaagggcttaaatagcttcatggatgaacaaattata
gattttgataaattaacagatagaggattttttggaatctttggaccaactggaagtggg
aaatcaaccatattagatggaataactctagcattatatggaaatgtatcaagaaaaagc
tccaattttataaatactaattgtgacagattaaatgtaaattttgagtttcaaatatca
ggtagtgaaataagaaaatatatcattgacagggagtttaaaagaaaaaaagatggtgga
ataagctctggaaagtgtaaaatcgttgaagtaacaagttcagaagaagaaattttagca
gatggagttaaaactataaataagaaagttgaggagatagtaggtcttaatttagaagat
ttctcaagaactgttgttttacctcaagggaagtttagtgaattcttaaagcttgaaggt
aaggacagacgtgatatgcttgaaaggttgtttaaccttcaacaatttggagacaattta
tccagaaaacttagtgcaaagataagcaaagagcgaactgatagcaatattttagcggga
caattaagtggatacagcgatgttagtcaagaaaaattaaaagaaaaggaaaacgctctt
gaggaattaaaaaataatctggaagctttgaaaaaggaattagatataatagaaaagaag
cataaagaaaatgaagaaatatggaagctacagcttgatttactatattataaaaataaa
gagcaaacattaaaggaaaaagaggaaaacataaattcatatatagaaaagataaagcta
ggcgaggcaggagcaaaggtactaccttatttaaatgcatttgaaagcactagaaaagcc
tttgataaaaatgagattgagttagaagaattaaaatcaaagataggtaagataaaagaa
gaaaaagaaaagatagaacaactttggtgcatggcaaaagataaaaaagagaataaactt
cctcaattaatgatgcaggaacaaaaagttaaagatgctattgaagaaaagaatttgata
cgtgagatagaaaataaaatagatttattaaaggcacaaattaaagaatgtgatgctaaa
aataataatatacagagtgagctcattaaaatagaagaagaaataagtaataaaaataaa
ttaataaaagaagacgaaaaaacatatgataatttgaaaattgaagaaagtttaaaggaa
gcagttcaagaaggaataattgtagaagaaaagttagaaaaaataaatggaattctagtt
aaggataagcaaaagaaagcagttattgaaaaagaaaatagtgaaactatacttaaagga
aaagctttaagggaagttttagataaagaaaaaaagagtttggaagataaagataaacaa
tatgagtttttacttaaaaattcgccaggtgaacaaaaagatttagttaatttaaaacag
ttgatagtggaaaatgagcaaaaatggagcagttatgtaaagctgaacaaagaaatagat
ttctctagagaagagataaaaaacttacaaatagatatattaagtagaagagaagaagaa
aagcaacttgaaaaagaactagaggaaataaaaaatactcaaagggaggttatgagagaa
aatttagcacatactcttagacaggaacttaaagatggagatacatgtcctgtatgtgga
tcaactcatcatatgaaagaaaatatcaggatttttgaagttcaagatgtgaagaatgta
gaggaaaaaataaaactaaaagaaaattcaataaagattattagtagcaaaataactcaa
ggtgaaactaaggtaaatagttttaacgaaaaaattaaagttaatcttgaagaaattgaa
aagctcggaactgcgtttaatgaaaaacctttggaagagttaaaacaggaatttataaat
ttagaaaaagctttagaaagttattctaaagctaaagaagaacttgaaaaaagtgttaat
aagctgaggaatgaaattaatattaaaaccggagaaataaatgaattacgagcagtagtt
agaactaaccaaagacagcttgaagatttggaaaagagtattacagaaaatacagaagaa
ttgaatattttaaaaaatagattggattcgctaagggcaaagacattagtaactgatttt
aataaaaaaagcgaagaaattaaagctgttgaaaaagagagagaaagattatcagaggtt
attaaagttaacagggagctaatagaaaagttagaaaagaataaagaaaatttaactagt
gaagttattttagcaaaagaaaatttaactaggtataatacagaattaagtaattatgaa
aaaagtaaagaagaaaaaatacaagcgataaagaacaaagtcgataatacagatgatctg
gtttcactactacataaaattcaggaaaatattgaaaatattaatagtgagtttaaggaa
agtgaaaacaataaaaataaaatagagaaagaatttaatgaaaacaatgagcgattaatt
tctgcaatcagtaaatataaagaattaagtaaacgaaaaaaagatgaagaagctcagtta
gaagttgcaatagacagtgaaggttttaattcccttgacgatgtcaaaaaaaatataatt
ggaaaagaagaaattaatgattataaattaaaagtagaaagttataaaagtgaagtatca
aaagtaaatggagcaattgaaagtttacttaataaaatagatggtaaagagttaagtgaa
aaagaatatacagaaataaaactcttaaaagatattaaagaaaaagagtttaatgaaatt
aatgaagacaaaattaaggtagatgaagaattaaaaaacataaaaaataagttggaagag
cagaaagatctcttagataagaagatgaaactagaacataaattggctcttcttggtgat
ttggaaaagttatttaagggaaagaaatttgttgagtttgtagcagtaagtaagcttaag
tatgtttcagttgaagcatctaagagattgaaagaaataactcatggaaattatggacta
gaggttgatgacaatagcagatttataattagagattataaaaatggtggagccaaaaga
gattctactactttatcaggaggagaaacatttttagcatctttatcattagctttggca
ttatcagcacagattcagcttaaaggaactgcaccattagaattatttttccttgatgaa
ggatttggtactttagatgatgatctacttgaagttgttatgaattcattagaaaggatt
cataatgaaaaattgaaggttggtataataagccatgttgaagcaataaagaatagagta
ccagtaaaacttatgattactccagcagaatcaggtatgggtggaagcaaagttagaatt
gaaagaaactaa
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