KEGG   Clostridium beijerinckii ATCC 35702: Cbs_1175
Entry
Cbs_1175          CDS       T03415                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
cbz  Clostridium beijerinckii ATCC 35702
Pathway
cbz02024  Quorum sensing
cbz03060  Protein export
cbz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cbz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Cbs_1175
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Cbs_1175
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Cbs_1175
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cbz02044]
    Cbs_1175
Enzymes [BR:cbz01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Cbs_1175
Secretion system [BR:cbz02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Cbs_1175
  Eukaryotic Sec-SRP protein
   Cbs_1175
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 AAA_17 CbiA AAA_31 nSTAND3 AAA_14 Zeta_toxin SRPRB ResIII MMR_HSR1 ParA AAA_18 AAA_30 cobW ATP_bind_1 Arf APS_kinase AAA_16 NTPase_1 AAA_24 AAA_25 ArsA_ATPase NPHP3_N ATPase AAA_33 Roc PduV-EutP KAP_NTPase Acetone_carb_G
Other DBs
NCBI-ProteinID: AIU04659
LinkDB
Position
1396951..1398303
AA seq 450 aa
MAFEGLGEKLQETFRKLKGKGKLTEKDIKEAMREVKLALLEADVNYKVVKQFISSVSSKC
VGSEVLESLTPGQHVIKIVNEELTNLMGGTESKLNYSSSGLTVIMLVGLQGAGKTTMCGK
LALNLRKNNKKPLLVACDIYRPAAIKQLEVVGKQIEIPVFSMGDKVSPVEIAKNAITHAK
DNGNNVVIIDTAGRLHIDEELMQELKNIKDNVNPSEILLVVDAMTGQDAVNVAENFNNDL
DLSGVILTKLDGDTRGGAALSIKTIIDKPIKYAGVGEKMNDFEVFHPDRMASRILGMGDV
LSLIEKAQEAIDEKEAADLGKRMLNQEFNFEDYLMAMEQMKKLGPLNKIMEMIPGLNSKE
LQGVDFDKGTEALDKTKAIIQSMTLKERRNPSLILKSPSRKSRIAKGSGTNIQEVNKLMK
GYEMMKKNMKQMKSFQKQAKKGGLFGKLPF
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggctttcgaaggattaggtgaaaaattacaggagacttttagaaaattaaaaggtaaa
ggaaagttgactgaaaaagatataaaagaagccatgagagaagtaaagcttgccttacta
gaagcagatgttaactataaagttgttaaacaatttatttcttctgttagttctaaatgt
gttggaagtgaagttcttgaaagtctaacaccaggacaacatgtaataaagatagttaat
gaagaacttactaatcttatgggtggaactgaaagtaaacttaattatagtagttcagga
cttacagttataatgttagttggattacaaggagcaggtaaaactactatgtgtggtaaa
cttgcgctaaaccttagaaaaaataataaaaagccattattggtagcttgcgatatttat
agaccagcagctataaagcaattagaagttgtaggaaaacaaatcgaaattccagtattt
tcgatgggagataaagtaagccctgttgaaattgcaaagaatgcaatcactcatgcaaaa
gataatggaaataatgtagttatcatagatactgcaggtagacttcacattgatgaagaa
ttaatgcaggaactaaaaaatataaaagataatgtaaacccgtcagaaatattattagtt
gttgatgctatgacaggtcaagatgctgtcaatgttgcagaaaactttaataatgattta
gatttaagtggagttattttaacaaaactagatggtgatactagaggtggagctgcactg
tcaattaagactataattgataagccaatcaaatatgccggtgttggcgaaaaaatgaat
gattttgaagtgttccatcctgatagaatggcatcaagaattttaggaatgggtgatgta
ttatcgcttattgaaaaagctcaggaagccattgatgaaaaggaagcagctgatttaggt
aagagaatgttaaatcaagaatttaactttgaggattatctaatggcaatggaacagatg
aaaaaacttggacctttaaataagattatggaaatgatacctggcttaaattcaaaggaa
cttcaaggagttgactttgataaggggactgaggctcttgataagactaaggcgattatt
caatcaatgacattaaaagaaagaagaaatccaagtcttatactaaaatctccatcaaga
aaaagcagaatagctaaaggatcaggtactaatatacaagaagttaacaaactcatgaag
ggctatgaaatgatgaaaaagaacatgaagcaaatgaagtcattccagaagcaggcaaag
aaaggcggcctatttggcaagttacctttctaa

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