Clostridium beijerinckii ATCC 35702: Cbs_2545
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Entry
Cbs_2545 CDS
T03415
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
cbz
Clostridium beijerinckii ATCC 35702
Pathway
cbz00900
Terpenoid backbone biosynthesis
cbz01100
Metabolic pathways
cbz01110
Biosynthesis of secondary metabolites
cbz03010
Ribosome
Module
cbz_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
cbz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Cbs_2545
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Cbs_2545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cbz03011
]
Cbs_2545
Enzymes [BR:
cbz01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
Cbs_2545
Ribosome [BR:
cbz03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Cbs_2545
Bacteria
Cbs_2545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
S1_2
DUF7231
CENP-M
Motif
Other DBs
NCBI-ProteinID:
AIU04087
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All DBs
Position
2952107..2954014
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AA seq
635 aa
AA seq
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MSKVILAKNSGFCFGVQRAVNEAIRIQKEHNSKIYTLGPLIHNNDVVKYLEENNIFSIEF
EEIDKLNKGDTIVIRSHGVSETVLDTLEQKELKVINATCPFVANIQKKVKKYSKEGYHIV
ILGDKNHPEVIGINGWCDDKAIITKDGTFDEENMPHKVCVVSQTTEKMKNWEETLKNLSY
AREILAFNTICAATDVRQRSTNKISKKTDAMIVIGGKNSSNTTKLYQIAKENCENTIHIE
NAKDLPISFIKNNNINKIGVTAGASTPDWIIREVLDIMNTENNNFEDQLSLMNELDKRFV
IGDEVQGEILSKTRDSVIVSLVGYKSDGVIPFTELSAKEDPLTFADKLNIGDTINAKVIK
LQNNDGYVVLSRLEYEREEAFKELEKIYSEGTTFEVNVKEAREKGIVADYKGARIFIPAS
QIDIKFTKDKSEYVGKKLEVKLIDFSLKNPVKLVASRRVLLEESKNSEDAKAWESFNLGD
VIKGEVKRFTDFGAFVEVNGIDGLLHLSQISWNHIKKVSDVLKEGQIIDVKIIGLDKEAK
KLSLSIKELVAKPWDNAKEKYPEGSIVLGKVVRLNDFGAFVELEPGVDGLVHISKISHNR
IEHPSEVLKIGEEIKAKILSVDEENKRISLSIKDV
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagttattctagcaaaaaattcaggtttttgctttggagttcaaagagctgta
aatgaagctatacggattcaaaaagaacataattcgaaaatctatactttaggtccttta
atacataataatgatgtagtaaaatatttagaagaaaataatatattttctatagaattt
gaagaaatagataaattaaataaaggggatactattgttataagatctcatggtgtatct
gaaacagttttagatacacttgaacaaaaggaactaaaagtcataaatgcgacttgtcct
tttgttgctaatattcaaaaaaaagttaagaaatattcaaaagaaggatatcatatagta
atattaggagataaaaatcatccagaagtcattggaattaatggatggtgtgatgataaa
gcaattatcactaaagatggtacttttgatgaagaaaatatgccgcataaggtatgtgtt
gtatctcaaacaactgaaaagatgaagaattgggaagaaacactgaaaaacttaagttat
gcaagagaaatattagcttttaacacaatttgtgcagctactgatgttagacaaagaagt
acgaataaaatatccaaaaaaacagatgctatgatagttattggcggaaaaaatagttcg
aatactactaagttatatcaaattgctaaagaaaattgtgaaaatacaattcatattgaa
aacgcaaaagatctaccaataagttttataaaaaataataatataaacaaaataggagtt
acagctggtgcatcaacaccagattggattattagggaggtactagatattatgaacaca
gaaaataataattttgaagatcaattatcattaatgaacgaattagacaaaagatttgtt
attggcgatgaggtacaaggagaaatactttcaaagactagagattcggttatagtttca
cttgttggatacaagtcagatggagtgattccatttacagagttatctgcaaaagaagat
ccactaacatttgcagataaacttaatataggtgatactattaatgcaaaagttataaaa
ctacaaaataatgatgggtatgtagtattatcaagattagaatatgaaagagaagaagct
tttaaagaacttgaaaaaatatattcagaaggaacaacatttgaagttaatgttaaagaa
gctagagaaaaagggatagtagcagattataagggagctagaatatttattccagcatca
caaattgacataaagtttactaaagataaaagtgaatatgttgggaagaaattagaagtt
aaattgatagatttttctctaaagaatcctgtaaaattagttgcttcaagaagagtttta
ttagaagaaagcaagaattctgaagacgcaaaagcttgggagagttttaatcttggggat
gttataaaaggtgaagtaaaaagatttacagactttggagcttttgtggaagtcaatggt
atagatggattattacatttatcacaaatttcttggaatcatatcaaaaaggtaagtgat
gtattaaaagaaggtcaaattattgatgttaagatcattggtcttgataaggaagctaaa
aagctatctttaagcattaaagaacttgtagctaagccttgggataatgctaaagaaaaa
tatccagaagggtctattgtacttggtaaagtagttagattaaatgattttggtgctttt
gtagaattggaaccaggagtagatgggttagttcatatatcaaagatatctcataataga
atagagcacccttctgaagttttaaaaattggtgaagaaattaaagctaagatattaagt
gttgatgaagaaaataaaagaataagcttaagtataaaagatgtataa
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