Clostridium beijerinckii ATCC 35702: Cbs_4376
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Entry
Cbs_4376 CDS
T03415
Name
(GenBank) YD repeat-containing protein
Organism
cbz
Clostridium beijerinckii ATCC 35702
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
Phage_GPD
Phage_holin_3_6
Motif
Other DBs
NCBI-ProteinID:
AIU04764
LinkDB
All DBs
Position
complement(5039503..5047164)
Genome browser
AA seq
2553 aa
AA seq
DB search
MILTYKSLKVEIPYEAIQIEDIDILQPINDHAYLKIKLLIEEGKIIEYLNKNVSDEKITV
SRIEDTGEEIKLFVGKINEVFMSYEGSVHVMELGAVSYTKDFDIKKNSRTFCNLDMTYQE
VITKVLDAYADKAFTDNITNGKTIGEFILQYEETDWEFLKRLASHFNGVLLAETTEEYGR
FHFGIPDLNNNNKINIDDYEVVKDIDNFNKREAIGFEENYLQEYTTWDIASPIKLILGEK
VLFNQIECVVEKIHTEVYKEEIRTIYTLGLERGLRTSYMVNHKIFGMSIPATVKDVQGNT
MKVHFEIDQEYEECANQKYFTYAIESSAWYCMPEKESQVHIYFPTNDEKEAIAVHAVRIG
EGSARTQNPDIKSFSHTGGSEMKLTPSDMNFSPGGGGVSLNLAQSGDVSLNGQNINLTAT
ENLELGIRDGSGDAPPFRPQNINISAKSKIEIAKGGIGIQMEDATFLKGSTIKYEGSAKD
PVELPDEIAHRNDGDAEAIEEINNQAKANMEAKVDEAKSKIGFGVVASVIGAVAVGVGIA
VLAAATVATGGLALAVAGAAVASGVTAMAVGASETSEGLSDYSKAQSGDYSKSYNFMRDT
VCGGNETLYNVVKYGSVMIAGISTAILTGGATIEAMTQTLGKIGLDSAMNTGFELIADYA
DDGKIDNGWESYAESFALSCGLSGGGTTAFKGVEKIGKGLELGCPTMSKLRIATDVAVDM
GGQLATTGDANLTSTLIRKYVSNKLCFSDPVDGATGSLYIPATDIVLPDIHEEFKIERKY
ESVNNRIGLLGLGWTTNFETCLGVEGEKINVLCPDGHIESFYLSDDEWVNDKGGAKIYSL
KQDKDYWIFKTSLDKKTYKYNSSGKLINITDKHGNKLSLTYIGDNIETLTTFSNYKLFFT
YKDGKVIEIKDELGRTVQYKYDGDYLKDVIHVDQGITRYTYDDKGYISSITDQNGHTYTK
NFFDKKGRVIRQDFPNDDTCKIAYDDSEKEVTFYYTKSQRTERTRFNKEGLITHLFYEDG
TTEEYKYDDYQNKIYIKDRNGFETHKVYDEFGNLLKETLPNGLVTDYTYDENGNLIKETD
NEDKEIIYTYDSQGNLLEKKTKLSAANWITERFTYDSYGRILSKTDGNGNTSKYEYENAS
SLEGKQGKDPVRVITSSGYEYEYTYDKVGRNTEITTDYGTIEFGYNNLNFVASIKDANGN
VTIKNYDNMGNLTSLYTPNACIKGSISDEGYKYTYDHMDRLISIKNPIGIIEKNIRDSEG
NIIKEINPNYYNPETYDGIGVEYAYDKDNRKIKTIYPDGGIERFFYDSNGNVIKHISPEY
YNEETDDGLGYSYTYDSTNRLSSIINEDGVVEKRFEYDLHGNIIKEVDVEGNSTLFKYDL
AGNLIEKRVPAEKDNIGNVKYNLTCYAYDKNSNKILERHGINLVSENEICNYYHEIYFEY
DEENRLIEVKDKYGAKARYKYDCLNKKTYESFKINDTTTKAIHYIYDKVGNLTQKKEEIN
GGFVSPETKGRNVWAITSYEYDKNGNITKITTPKGYEIGRVYDKADRVIEQHEKDEANGI
FRSYVYNYDKTDNIISISEYSGEEAKLISNKYTSENNYMVHWSERYENRKENEKLFEKIG
FKEEQKKKAYTYDSQNRLTHFINFSGNITRLFYDKNDRIIKQVLPEQYDNEKDDGVGTTY
SYNLKGQVIEVKNALGETVTKNTYDPKGNLKTRVDGENNKVEYTYTLLGQIKDIVTPNSR
KENKSAQSYKYDARGNITGITDGNGNETSYLLDDWGRIIQITTPEGGSEKYTYDYAGNIT
STTDANGGTIEYIYNSLGQVCEIKDQEEIALEARKAEEAREKAMEEAKKKAEENFYGVSL
NQAPRRRSFTERIKDKKEREDIEEHQLSKVEKEEDPNKNKLNVIDQRFKYNPDGSLKSAY
TGNMQYEYSYSIEGMLESKSASGRTLLKYTYDKNNNIKTIKDITGKSSIYSYDDADRVKL
IQDDKQNNLAIYDYNKNDSIKSVRLGNGLKTDYTYDGDGNVQSLVTISSNGEVLVDYNYA
YDLNGNRLQKVSSKHKNFYSYDSMNRLVDSRYDDRCESFTYDKVGNRLTKTTNDITEKYV
YNVKNQLKELHNNSGINHFTYDKQGNTIKEETQNGNNIFEYNSLNQQVKAITKEGNTLVS
RYDTEGLRAEIEENEKLTKFIFHKENVLVEADKDFNAISRFTRGYEVVAADIVEASKYSD
SKFSSNIGRYYYTTDEQGSTVLITDKYRNVKNEYYYDPFCNVLGSNEQVHNRVTYTGQQY
DSITKQYYLRARFYNPLIGRFAQEDIYRGDGLNLYAYCGNNPVRYYDPSGYAFLDNLQYD
SLKDIAKRMRQVPGKKAKYGYWTGDKGNSNFVFQNTDKTDFHNSVESIMKAHNATYVPYK
DGQVDFDYFSVFTVDVEVSSKRRITHPNTNNEIARTIVKHNGDYTKMYNDNVMGIASGSQ
RSQDIAKNIIKSTEIYAGNKELTENERIEAINEILKDKQKEFGQTIHEENLVKEMKKNKT
QWVDTDINHQFGHLGGTSEAKRQELEKSMCKSK
NT seq
7662 nt
NT seq
+upstream
nt +downstream
nt
atgatactgacatataagagtttaaaagtagaaataccttatgaagcaattcaaatagaa
gacatagatatattacagcctataaatgaccatgcatatttaaagattaaattgttaata
gaagaaggaaaaataatagaatatttaaataaaaatgtaagtgatgagaaaataactgta
tcgagaattgaagatactggtgaagaaattaagttatttgtaggaaagataaatgaagtt
tttatgtcttatgaaggcagtgttcatgttatggaattaggggctgtgtcttatacaaag
gattttgatattaagaaaaatagcagaaccttctgtaatttagatatgacttatcaggaa
gttataacaaaggttttagatgcttatgctgataaggcttttacagacaatataacaaat
ggaaagactattggggaatttattcttcagtatgaggaaactgattgggaatttttaaag
aggttagcaagtcattttaatggtgtattacttgctgaaaccacagaagagtatggaaga
tttcactttggaataccagatttaaacaataataataaaattaatatagatgattatgaa
gtagtaaaagatattgataatttcaataagcgtgaagctattgggtttgaagaaaattat
cttcaagaatatacaacatgggatattgcaagcccaattaaattaatacttggtgagaaa
gttttattcaatcaaattgaatgtgtagtagagaaaattcatactgaggtctataaagaa
gaaatcagaacaatatacacattaggtcttgaaagaggacttagaactagctatatggta
aatcataagatttttggaatgagtattcctgcaacagttaaagacgtacaggggaatact
atgaaagttcactttgaaatagatcaagaatatgaagagtgcgcaaatcaaaaatatttt
acttatgcaatagaaagcagtgcttggtactgcatgccagaaaaagaaagccaggtgcat
atttattttccaaccaatgatgagaaagaagctattgcagttcatgcagtaagaattgga
gaaggctctgcaagaacacaaaatccagatattaagtcattttctcatacaggaggaagt
gaaatgaagctgactccaagtgatatgaatttttcaccaggtggcggaggtgtaagttta
aacttagcccaatcgggagatgtatctcttaacgggcaaaatataaatcttacagcaact
gaaaatttagaactcggtattagagatggaagtggagatgcacctccgtttaggccacaa
aatataaatatttctgctaagagcaaaatagaaatagctaaaggcggtattggaattcaa
atggaagatgccacatttttaaagggatctaccataaaatatgaaggaagtgctaaagat
ccagtagagctaccagatgaaatagctcatagaaatgacggagatgcagaggcgatagag
gaaattaataatcaggctaaagctaatatggaagcaaaggttgatgaagctaagagtaaa
attggttttggagtagttgcttcagttattggagcagtggcagttggagttggaattgct
gtacttgcagcagctacagttgcaactggaggattagctcttgctgttgctggagctgcg
gtggcatctggtgttacggctatggcagtaggtgcatctgaaaccagtgaaggtttgtca
gattatagcaaggctcaaagtggagattattcaaaatcctataattttatgagggacact
gtgtgtggaggaaatgaaactctttataatgttgtaaaatatggatcagttatgattgca
ggaataagcactgcaattttgacaggtggagcaactatagaggctatgactcaaacctta
ggaaaaatagggcttgattcagctatgaatacaggatttgaattaattgcagattatgcg
gatgatggaaaaattgataatggatgggaaagctatgcagagtcctttgctttaagttgt
ggcttaagcggtggaggtacaactgcatttaaaggagtagaaaaaattgggaaaggctta
gagctaggatgtccaaccatgagtaagctgagaatagcaacagatgtggcagtagatatg
ggaggccaattggctacaactggagatgcaaatctaacatctactttaataagaaaatat
gttagtaataaattatgtttctctgaccctgtagatggagcaacaggaagtttgtatatt
ccagcaacagatatagttcttccagatattcatgaagaatttaaaatagaaagaaagtat
gaatctgtaaataatagaatagggcttttgggccttggctggactacaaattttgaaact
tgccttggagttgaaggggaaaaaataaatgtactttgcccagatggacacattgaaagc
ttttatttaagtgatgatgagtgggtaaatgataaaggtggagctaagatttattcctta
aaacaagacaaggattattggatatttaaaacttcacttgataagaaaacttataaatac
aatagttctgggaaattaataaatataactgacaaacatggaaataagctttcattaact
tatataggagataatattgaaactttaacaaccttctcaaattataaattattctttacc
tataaagatggaaaagtaattgaaataaaagatgagcttggaagaacagttcaatacaaa
tatgatggagattatttgaaagatgttatccatgttgaccagggaataacaagatatacc
tatgatgataaaggatatataagcagtataacagaccaaaatggacatacttatactaag
aacttctttgataaaaaaggaagagtaattcgtcaggacttcccaaatgatgatacctgc
aaaatagcttatgatgattcagaaaaagaagtaacattctactatactaagagtcaaagg
acagaaagaacaaggtttaataaagaggggttaataacacatttattctatgaagatgga
actacagaagaatacaagtatgatgattatcaaaacaagatttatataaaagatagaaat
ggatttgagactcataaggtctatgatgagttcggtaacttattaaaagaaactttacca
aatggattagttacagactacacttatgatgaaaatggaaacttaataaaagaaacagat
aatgaagataaagaaattatctatacttatgatagccaaggtaatttattggaaaagaaa
acaaagctttcagcagcaaattggattactgaaagattcacatatgattcctatggaaga
attctaagtaaaactgatgggaatggaaatacatcaaaatatgaatatgaaaacgcaagc
agcttagaaggaaaacaaggaaaagatccagtaagagtaattacaagtagtggatatgag
tatgaatacacttatgataaagtgggcagaaatactgaaataactacagattatggaaca
atagaatttggttataataacttaaactttgttgcaagtattaaagatgccaatggaaat
gtaacaataaagaattacgataatatgggaaatttaacaagcctttatacgccaaatgca
tgtataaaaggaagcatttctgatgaaggttataaatacacctatgaccatatggataga
cttataagcataaaaaatccaattggaattatagaaaaaaatataagagacagcgaagga
aacataataaaagaaataaatccgaattattataatcctgaaacctatgatggaattgga
gtagaatatgcttatgataaggataatagaaaaataaaaactatctacccagatggagga
atagaaagattcttctatgatagtaatggaaatgtcattaagcacataagcccagaatat
tacaatgaagaaactgatgatggtcttggatacagctatacttatgattctacgaataga
ttgagttctataataaatgaagatggtgtagttgaaaaaagatttgaatatgacttacat
ggaaatattattaaggaagtagatgttgaaggaaattctacattatttaagtatgattta
gcaggaaacctaattgaaaagagagttccagcagaaaaagataacattggtaatgttaaa
tataatttgacttgctacgcttatgataaaaatagcaataaaatcttagagagacatggt
ataaacttagtctcagaaaatgaaatctgtaattattatcatgaaatttactttgaatat
gatgaagaaaacaggctcattgaagttaaagacaaatatggagcaaaagcaagatataaa
tatgactgcttaaataaaaagacctatgagagctttaagattaatgatacaacaactaaa
gcaattcattatatttatgataaggtaggaaacctaactcaaaagaaagaagaaataaat
ggaggttttgtatcaccagaaacaaagggcagaaatgtctgggcaataacaagttatgaa
tatgataaaaacggaaatataacaaaaataacaactccaaaaggctatgaaatagggaga
gtttatgataaagctgatagagtcatagagcagcatgaaaaagatgaagctaatggaatc
tttagaagttatgtttataattatgataaaacagataatataatcagcataagcgaatat
tctggagaagaagcaaagcttataagtaataaatatactagtgaaaataactacatggtt
cattggtctgagagatatgaaaatagaaaagaaaatgagaaattatttgagaagattgga
tttaaggaagaacaaaagaaaaaggcatatacttacgattctcaaaacagacttactcat
tttataaatttctcaggtaatataacaagattattctatgataaaaacgatagaataata
aaacaagtacttccagaacaatatgataatgagaaagatgatggagttggaacaacttat
tcctataacttaaaaggacaagttatagaagttaaaaatgctttaggtgaaacagtaaca
aaaaatacttatgaccctaaaggtaatcttaaaactagagtagatggagaaaataataaa
gttgaatacacttatactttattaggtcaaattaaggatatagttactccgaattctaga
aaagaaaacaaatcagctcaaagctataagtatgatgccagaggaaacattacaggaata
actgatggtaatggaaatgaaacaagctatcttttagatgattgggggagaattattcaa
ataacaacaccagaaggcggaagtgaaaagtacacttatgactatgcaggaaatataaca
agtacaacagatgccaatggtggaactatagaatatatttacaatagcttaggccaagtt
tgtgaaataaaagatcaagaagaaatcgccttagaagcaagaaaagctgaagaagccaga
gaaaaagctatggaagaagctaaaaagaaagcagaagaaaacttctatggcgtgtcttta
aatcaagcccctcgaagaagaagctttacagaaagaatcaaagacaaaaaagaaagagaa
gacatagaagaacatcaattatctaaggttgaaaaggaagaagatccaaataaaaataaa
ttaaacgtaatagaccaaaggtttaaatacaacccagatggaagcttaaagagtgcatat
acaggaaatatgcagtacgagtactcttatagtattgaaggaatgcttgaatctaagagt
gcttcaggaagaactcttctaaagtacacttatgataaaaataacaatataaaaactatt
aaagatatcacaggaaagagcagtatttacagctatgatgatgctgatagagttaaatta
attcaagatgataagcaaaataaccttgctatctatgactataataaaaatgatagtata
aaatcagtaagattaggaaatggcttaaagacagattatacttatgatggtgatggcaat
gttcaaagtttagttactatatcatcaaatggtgaagttttagtagattataattatgcg
tacgatttaaatggaaacagacttcaaaaagtaagttcaaagcataagaatttctatagc
tatgattcaatgaacagacttgttgattcaagatatgatgatcgatgtgaaagctttact
tatgataaagtaggaaatagattaactaaaacaacaaatgatatcactgaaaagtatgtt
tataatgtaaagaaccaattaaaggaattacacaacaattctggaataaaccactttaca
tatgataaacaaggaaatacaataaaagaagaaactcaaaatggaaataatatctttgag
tataattctttaaatcaacaagttaaggctataactaaagaaggaaatactttagtaagt
aggtatgatacagaagggttaagagctgaaattgaagaaaatgaaaagttaacaaagttt
attttccataaagagaatgttttagttgaggctgataaggactttaatgcaatctctagg
ttcacaagaggttatgaggttgttgctgctgatattgtagaagcaagcaaatattcagat
tctaaattcagttccaatataggcagatactattacaccacagatgaacaaggaagcaca
gtattaattactgataagtatagaaatgtaaaaaatgagtattattatgatccattttgt
aatgttcttggaagcaatgaacaagttcataatagggtgacttatactggacagcaatat
gacagcataactaagcagtattatttgagagctaggttttataatcctttaattggcagg
tttgctcaagaggatatttatcgtggagatggattaaatctttatgcatattgtgggaac
aatcctgttagatactatgatcctagtggctatgcatttttagataatttacaatatgat
tctctgaaagatattgcaaagcgaatgaggcaagtaccaggaaaaaaagcgaagtatggt
tattggacaggcgataaaggaaattctaattttgtatttcaaaatacagataaaacagac
tttcataatagtgtagaatcaataatgaaagcacataatgcaacttacgtgccatataag
gatgggcaagttgattttgattatttttcagtatttacagtagatgtagaggtgtcttca
aagagacggataactcatccaaatactaataacgaaattgctagaacgattgttaaacat
aatggagattatactaagatgtataatgacaatgtaatgggaattgctagtggttcacaa
agatctcaggatattgcaaaaaatattattaagtcaactgaaatatatgcaggaaacaag
gagttaactgaaaatgaaagaattgaggcaataaatgaaatactaaaagataaacaaaaa
gaatttggtcagactatccacgaagaaaatttagtaaaagaaatgaaaaagaataaaaca
cagtgggtggatactgatataaatcatcaatttggacatttaggtggaacatcagaggcc
aaaagacaagaattagaaaaaagtatgtgtaagagcaagtaa
DBGET
integrated database retrieval system
