Chlamydia caviae: CCA_00007
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Entry
CCA_00007 CDS
T00125
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
cca
Chlamydia caviae
Pathway
cca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CCA_00007 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cca03400
]
CCA_00007 (recB)
Enzymes [BR:
cca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CCA_00007 (recB)
DNA repair and recombination proteins [BR:
cca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CCA_00007 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_22
AAA_11
AAA_12
DUF7660
ResIII
Motif
Other DBs
NCBI-ProteinID:
AAP04760
UniProt:
Q824Y1
LinkDB
All DBs
Position
complement(7821..10958)
Genome browser
AA seq
1045 aa
AA seq
DB search
MKPFDIFNPQTSIRGKYFLEASAGTGKTFTIEQIVLRALLEGSVSHVENILAVTFTNAAT
NELKLRIQDNLKQALCQIKSVLEDPSKSLPPYLKDTSNVKLLYMQVRNALATIDRMAIFT
IHGFCNYVLQQHFPKMQMTQKNAALTHSQAVFHHIKKYLSQDLWRSVLFPEQFYLLAAKY
NSNSKHTAFLTDKLLSSYTLQTFEHLPQTSTTLDALRSWHNSIRSKIQDIPKEDFLRQIL
QHKDGFKKQPFPIDEDLRLFVECLYASETSVQLFSFSKIAETFHPKNRLTRYKPSKAFSH
IEETLWSLYTEQFCNIELIFNTLLQDVQLYLKNHYTQWLSPDESILALEEILLSSRSEEI
IETLRKRFQLVLIDEFQDTDRKQWNIFSKLFANDAFSGSLFLIGDPKQSIYEWRNADLAT
YLKAKSSFPKSSQLHLINNYRSTAQLMEAVNILFCKCSPFLQIPSYEPIEYHPLCPQSSE
HFENSHHAPIHFFSYDDISDQAAWISHTASYLQATYHIPLGRMAILVSDSAQAFDLITHC
SIPVAFSKNKSIFHLTETYLLTLAWLEAILHPENYEKIQRVLLSSLFRHNLSDTIEKKEL
YSTYFFSLRSYVFDYGLLATFYHFMTLQGEALLKTPQGDLSFQEMERLCAYLDTVSSHPQ
HQLLYLQYFSETGRWEESLSFSSYSEDTEILKITTIHASKGLEYDVVFCPGLDKSKKNKS
ASEWIREMYVACTRAKKQLFIPIQNSSNSRCNSALTNYVKHVGSYESILDLAQQLTKEHP
RLFSLSITETRSETTDPVYKIIPPSTFTLSIAPAKQIFSFSSVKLAFDNEVSLDNVPAEP
VASFVLPRGRKTGIIIHKILENISPNFKISFSKIVSIVTHFVKNTHLEGYEEIISQKLVT
TFSSPLSFATESFSLQDICPSKIACEESFLFSNQEQLWQGVIDLFFEYNDKYYIIDWKTS
FLGETSLEYSKENLLNYIKEQNLDYQGAIYTHAAKRFLQQFDIVSDVEMGFIFIRGMDPE
GNGFLCLPNQKISNPTITRKCPAYH
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgtttgatatttttaatcctcaaacatctattcgtgggaaatatttcttagaa
gcttctgcaggcacgggaaagacatttactatcgaacaaattgttctacgagccctttta
gaaggttccgtttctcatgtggaaaacattcttgcggtcacatttacaaacgctgcaacc
aatgaattgaaactcagaattcaagacaatcttaaacaggcattatgccagataaaatca
gtccttgaagatccctcaaaatctcttcctccttacttaaaggacacgtctaatgtaaag
ctgctttacatgcaggtgcgtaatgctttagcgactatagatcgtatggcgatctttacc
attcatggcttttgcaattacgttttacagcagcattttcccaaaatgcaaatgacgcag
aaaaatgctgctcttacgcactcacaggctgtttttcatcatataaaaaaatatctgtct
caagatctttggcgctctgttttatttcctgagcaattttatttacttgcagctaaatat
aattctaactccaaacacacagcctttttaaccgataagctactctctagttacacgctg
caaacttttgagcatttgccgcaaacaagcactactttagacgcacttcgctcatggcac
aactctatccgctctaaaatacaagatattccaaaagaagacttcctaaggcaaatactt
cagcataaagatggttttaaaaaacaacctttccctatagatgaagatctgcggcttttt
gtagagtgtttatacgcttcagaaacatctgtacagttattttctttttctaaaattgca
gaaactttccatcctaaaaaccgcttaacacgctacaaaccctctaaagcttttagccat
atagaagagactttgtggagtctctatacggaacaattttgtaatatagagctgattttc
aataccttactccaagatgtacaactgtatttaaaaaatcattacacacaatggttatcc
cctgatgagagtatcttagctttagaagaaattttgttatcttcaaggtctgaagaaatc
atagaaactctaagaaaacgctttcagttagtattaattgatgagttccaggataccgat
cggaaacaatggaacatcttttcaaagctatttgccaatgatgctttttcaggatcccta
tttttaataggtgatccgaaacaatctatttatgagtggcgaaatgccgatctcgcgaca
tatctaaaagctaaatcctcatttccaaaatcctcacagttgcatctcataaacaactac
cgctctactgctcaactgatggaagcggttaatattctcttttgtaaatgttcacccttt
ctacaaattcctagttatgaacccatagaatatcatcccctatgtcctcaaagtagtgag
cattttgagaattctcaccacgctcctattcatttcttttcctatgatgatatttctgat
caagctgcgtggatttcccatacggcttcttatttacaggctacttaccatattccccta
ggacgcatggcaattttagtgtcggattctgctcaagctttcgatctcattacccattgc
agcatccctgtagcattttctaagaacaaatcgatatttcatcttacagaaacctatttg
ttaaccttagcgtggttagaagctattctccatccggaaaattatgaaaaaatacaaagg
gtattattaagtagcctttttagacataatcttagcgatactatagaaaagaaagagctc
tactcgacctatttcttttcacttcgcagttatgtctttgattatgggcttttagcaact
ttctatcattttatgactcttcaaggagaagcgttgctaaaaaccccacaaggagatctt
tcttttcaagaaatggaaaggctttgtgcttatttagataccgtttcttctcatccccaa
catcaattactctatctacaatacttttctgaaactggacgctgggaagagagcctctcc
ttctcttcgtattctgaagatacggaaatattaaaaatcaccacgattcacgcatctaaa
ggattagaatatgatgttgttttttgcccagggttagataagtctaagaaaaataaaagc
gcatcagaatggatacgggagatgtatgtcgcttgtacacgggcaaaaaaacaactgttt
atccctatacaaaactcttcaaattcacgatgcaattctgcactaaccaactatgtaaaa
catgtaggttcttacgaatctattctagatttagcgcaacagctaaccaaagaacatccc
cgccttttttctttatcaattacagaaactcgttctgaaactaccgatcccgtttataaa
attattccaccgtcgacctttacattatccatagctcctgctaaacaaatcttctctttc
tcttctgtaaagcttgcatttgataatgaagtttctttagataatgttcctgcggaacct
gtagcttcttttgttcttcctagaggaaggaaaacggggattatcattcataaaatccta
gaaaatatctctccgaattttaaaatttctttttctaaaattgtgtccatagttacgcat
tttgttaaaaatacgcatttagaaggctatgaggaaatcatttctcaaaagcttgtaaca
acattctcttctcccctatcttttgccacagaatctttttccttacaggatatctgccca
agtaaaatagcctgcgaagagtctttcttattttccaatcaagaacagttatggcaaggg
gttatcgatctatttttcgagtataatgataagtactacattatcgattggaagacatca
ttcttaggagaaacaagcttagaatactctaaagaaaatcttctcaactatataaaagag
caaaaccttgattatcaaggtgctatttatacccacgcagcaaaacgatttcttcagcaa
ttcgacattgttagcgatgtagaaatgggatttatttttatccggggtatggatcctgag
ggaaatggattcctatgcctaccaaatcagaaaatatctaatcccacaataacccgaaaa
tgtccggcctatcattag
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