Chlamydia caviae: CCA_00012
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Entry
CCA_00012 CDS
T00125
Symbol
nfo
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
cca
Chlamydia caviae
Pathway
cca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CCA_00012 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cca03400
]
CCA_00012 (nfo)
Enzymes [BR:
cca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
CCA_00012 (nfo)
DNA repair and recombination proteins [BR:
cca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CCA_00012 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AAP04765
UniProt:
Q824X6
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All DBs
Position
complement(17659..18528)
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AA seq
289 aa
AA seq
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MQVFPPPQVPLLGAHTSTAGGLHNAIYEGQEIGASTIQMFTANQRQWRRRPLTDSLINSF
KTALKETSLSYIMSHAGYLINPGSPNPEILEKSRICIQQEIQDCISLGINFVNFHPGAAV
NDTKETCLDRIISSFSLMEPLFENSPPLVVLFETTAGQGTLVGSNFEELSYLIDNLNHKI
PVGVCIDTCHIFAAGYDITSPESWKRVLKNFDDVIGLSYLRAFHLNDSMFPLGQHKDRHA
PLGEGDIGIESFKFLMTNEDTRMIPKYLETPGGPDLWAKEIRQLQSFQK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtatttccgcctccccaagttcctttattaggtgcccatacatcgaccgctggg
ggtcttcacaacgccatttatgaaggccaagaaattggggcttctactattcaaatgttt
actgcgaatcagagacagtggcgtagacgccccctcactgattctctaataaattctttt
aaaaccgctcttaaagagacctctttatcctatattatgagccatgccggctacttaatt
aatcctggctcccccaatccagaaatcttagaaaaaagtcgtatttgtatacagcaagag
atccaggattgcatatctttaggaataaattttgttaatttccatcctggagccgctgtc
aacgacactaaagaaacctgcttagatagaattatttcaagtttttctttaatggagccc
ttatttgaaaactcccctcctctcgttgtcctttttgaaactacagcgggtcaaggcact
cttgttggcagtaatttcgaagaacttagttatctaatagacaatctcaaccacaaaatc
cccgtaggagtttgcatagatacttgtcatatctttgctgctggctacgatattacttct
ccagagtcctggaagcgggtgctcaaaaattttgatgatgtcataggattgtcatattta
agagcttttcatcttaacgactctatgtttcctctagggcaacataaggatcgccacgcg
cctttaggggaaggagatattggcatcgaaagtttcaaatttcttatgactaacgaagac
acgcgaatgatccccaaatatctagaaactcctggaggtccagacttatgggctaaggaa
attcgtcaattacagagttttcaaaaatag
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