Chlamydia caviae: CCA_00073
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Entry
CCA_00073 CDS
T00125
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cca
Chlamydia caviae
Pathway
cca03030
DNA replication
cca03430
Mismatch repair
cca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCA_00073 (dnaE)
03430 Mismatch repair
CCA_00073 (dnaE)
03440 Homologous recombination
CCA_00073 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cca03032
]
CCA_00073 (dnaE)
03400 DNA repair and recombination proteins [BR:
cca03400
]
CCA_00073 (dnaE)
Enzymes [BR:
cca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCA_00073 (dnaE)
DNA replication proteins [BR:
cca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCA_00073 (dnaE)
DNA repair and recombination proteins [BR:
cca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCA_00073 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
HHH_3
DUF655
Motif
Other DBs
NCBI-ProteinID:
AAP04825
UniProt:
Q824R6
LinkDB
All DBs
Position
complement(88015..91743)
Genome browser
AA seq
1242 aa
AA seq
DB search
MTWIPLHCHSQYSILDATSSIKSFVAKAKEYQIPSLALTDHGNLYGAIEFYKECRQNDIK
PIIGCEIYVAPTSRFDKKKERKSRVANHLILLCKNEQGYRNLCLLSSLAFTEGFYYFPRI
DRELLSQHSEGLVCLSACLSGSVAQAALESEEALEKDLLWYQNLFGDDFYSEIQLHKMSE
EKIASLGEEWLKHEYHQFIEAQIKVNQAVLATSRRLGIRSVATNDIHYIHPNDWLAHEIL
LNVQIGETIRIAKQNTYIPNPKRKAFRSREYYFKSPEEMALLFADHPETISNTLEVADKC
NLSLNLSSKHYPIYVPEFLKEKQTYTEEERYAASSTFLRELCEQGLFTKYTAEQLAHISK
KFPDRDPLELVKERLEMEMSIIIPKGMCDYLLIVWDIIRWAKDNGIPVGPGRGSGAGSVM
LFLLGITEIEPIRFDLFFERFINPERLSYPDIDIDICMAGRERVINYAIERHGKDNVAQI
ITFGTMKAKMAVKDVGRTLDVPLSKVNHIAKHIPEMNTTLAKALETDPHLNELYTNDSEA
AQVLDMAMHLEGSIRNTGVHAAGVIICGDHLTNHIPICISKDSTMITTQFSMKPVESVGM
LKVDFLGLKTLTSIHIAIQAIQKKTGKLLEMASLPLDDKTTFALLHQGKTMGIFQMESKG
MQELAKNLCPDSFEEIIAIGALYRPGPMDMIPSFISRKHGKEIIEYDHPLMESILKETYG
IMVYQEQVMQIAGSLASYSLGEGDVLRRAMGKKDIQQMLQERTKFCERACKNGIDADLAT
TIFDKMEKFASYGFNKSHAAAYGLITYTTAYLKANYPKEWLAALLTCDSDDIEKVGKLIH
EAHSMDICILPPDINESGTNFVATDKGIRFAMGAIRGIGKGLVESIVEEREKHGPYQSIQ
DFIQRSDLKKVTKKHTENLIDAGCFDVFESDRDVAQATLETLYDTISKEKKEAATGVMTF
FSLNTMHQEHRVALPPATNVVRRSKKEILKKEKELLGIYLTEHPMDAVKDILPQLSVVNS
GEFENLPHGSVIRTIFIIDKVTTRISSKGQRKFALLRVNDGVDSYELPIWPEMYTEQQDL
LEEDRLIYAILSIDKRSESLRLSCRWMRDLSLINQELIQECDDMFDKIKGQMQKMSYLNL
ETNKDTNQRKTSTMSKATDNRSQASIVKLSLDLGQLRHSHLCVLKQIIRKYPGPRTLSLV
FTKDNERIASISPDTDYFVSNDTSDLQKDLENSQLPVRFIAV
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
gtgacttggatacctcttcactgtcattctcaatattccattttagatgctacaagctct
attaagagctttgtagcaaaggcaaaggaatatcaaattccttcgttagcattaacagat
cacgggaacttatacggtgcgattgagttttataaagagtgtcgacaaaatgacattaag
ccgatcattggttgtgaaatttatgtagctcccacctcacgttttgataagaagaaagag
agaaaaagccgcgtagcaaatcatcttattcttttatgtaaaaatgaacaaggataccgc
aatctctgcttattatcctcattagcattcactgaagggttttattatttccctagaata
gatagagaacttctcagccaacattctgagggcttggtttgtctatcagcctgtctttct
ggctctgtagctcaggcagctttagaatccgaggaagccctggaaaaagaccttctctgg
tatcaaaatctatttggtgatgatttttatagtgaaatccagctccacaaaatgtcagag
gagaaaatagcttctctgggagaagaatggttaaagcacgagtatcatcaatttattgaa
gctcagataaaagttaatcaggctgtattagcaactagtcgacgtttaggaattcgttcg
gtagctactaatgatatccattatatccatcctaatgattggttagcgcatgagattctt
cttaatgtgcaaataggcgaaacaataagaatcgcaaaacaaaatacgtatatccctaat
cctaaaagaaaagctttccgcagtagggaatactattttaagtctcctgaagaaatggcg
cttctattcgccgatcatccagaaacaatctccaatactttagaagttgctgataaatgt
aaccttagcctgaatctttcgtctaagcattatcctatttatgttcctgagtttcttaaa
gaaaagcagacatataccgaagaagagcgctatgcagcgtcttctacctttcttcgtgag
ctttgcgaacagggcttgtttacgaaatatactgcagaacaacttgcgcatatctctaaa
aaatttcccgatcgcgatcctctagaattagttaaagaacggttagagatggaaatgtcg
attatcattcctaaagggatgtgtgactaccttcttatcgtttgggatattatccgttgg
gcaaaagataacggaatccctgtaggtcctggccgtggttctggagctggatctgtcatg
ttattcttattgggaattacagaaatagaacctatccgcttcgatttgttctttgaaaga
ttcatcaatcccgagcgtttatcctatcccgatatcgatatcgatatttgtatggcgggg
cgtgaacgtgttatcaactatgcaatagagcggcatggaaaagataacgtggctcagatt
attactttcggaacgatgaaagccaaaatggctgtaaaagatgtgggaagaactttggat
gtccctctttctaaagttaaccatatcgccaagcatattccagagatgaataccacattg
gcaaaagctttagaaacagatcctcatctaaatgagttatataccaatgactctgaggcg
gctcaagttcttgatatggcgatgcatctagaaggctcgatccgcaatacaggagtccac
gctgctggcgttattatttgtggagatcatttaaccaatcatatccctatctgtatttct
aaagattctacaatgattaccacacaattttccatgaagcctgtggaaagtgtgggaatg
cttaaggttgatttcttaggattaaaaactttaacgagtatccatattgctattcaggca
atccaaaagaagactgggaagctattagagatggcatctcttcccttagatgataaaacg
acctttgctcttttgcatcaaggaaagaccatggggatattccaaatggaatctaaaggg
atgcaagagttagcaaaaaatctctgtcctgattcctttgaagaaatcattgctataggc
gctttatatcgtcctggtcctatggatatgatcccctccttcattagccgaaagcatggt
aaagagatcatagaatacgatcatcctctcatggaatcgattctcaaagaaacctatggc
attatggtgtatcaagagcaagtgatgcaaattgctggctctctagcaagctattccctt
ggggaaggtgatgtcttacgtcgtgccatggggaaaaaagatatccagcaaatgcttcaa
gagcgtacaaagttttgtgaacgcgcctgcaaaaatggtatcgatgcagatttggcaaca
accatttttgataaaatggagaagtttgcttcctatggctttaataagtcccacgcggct
gcttatggattaattacttatacaactgcttaccttaaagcaaactatcctaaagaatgg
ctagcagcccttcttacctgtgactctgatgatattgagaaggtcgggaaactcattcac
gaagcccatagcatggatatctgtatcctccctcctgatattaatgagtcaggaacaaat
tttgtcgctacagataaagggattcgttttgctatgggagctatccgcggtataggaaaa
ggtcttgtagaaagtattgtcgaagaaagagaaaaacacggtccctatcaaagcattcaa
gacttcatccaacgttctgatttaaaaaaggttactaagaagcatacggaaaacctaatt
gacgcaggatgttttgatgtttttgaatctgacagagatgttgctcaagcgactttagaa
actctctatgatacgatatctaaagaaaagaaagaggctgcaactggagtcatgacattc
ttttctttgaatactatgcatcaagaacatcgtgtagcgttgcctccagcgaccaatgtt
gttcgtagatcaaaaaaagaaatactcaagaaagagaaagaattattaggcatttatctt
actgagcatccgatggatgccgttaaagatattttacctcaactttctgttgtcaactca
ggagagtttgaaaatctccctcacggctcggtaattcgaaccatatttattattgataaa
gtcaccacgcggatctcttcaaaagggcaaaggaaatttgctttgttacgtgttaatgac
ggtgtggattcttatgaattaccgatatggccagaaatgtatactgagcaacaagacctt
ttagaagaagatcgtttaatttatgctattttatctatcgataaacgtagcgaatcttta
cgcttatcctgccgctggatgagagacttatctcttattaaccaagagctcattcaagaa
tgcgatgatatgtttgataagatcaaaggtcagatgcagaaaatgtcgtatttaaactta
gaaactaataaagatacgaatcagaggaaaacatctactatgtcaaaagctactgataat
cgatctcaagcttctatagttaagctatctcttgatcttgggcaattacgccatagtcat
ttgtgtgtattaaaacaaatcatacgcaaatatcctggaccgcgtaccctctctctagtt
ttcacaaaggacaatgagcgtatagcttctatttctcctgataccgactatttcgtctcc
aacgatactagcgaccttcaaaaagacttagaaaattctcaacttcccgttcgatttatc
gctgtttaa
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integrated database retrieval system
