Chlamydia caviae: CCA_00429
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Entry
CCA_00429 CDS
T00125
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K02405
RNA polymerase sigma factor FliA
Organism
cca
Chlamydia caviae
Pathway
cca02020
Two-component system
cca02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cca00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CCA_00429
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CCA_00429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cca03021
]
CCA_00429
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
cca02035
]
CCA_00429
Transcription machinery [BR:
cca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CCA_00429
Bacterial motility proteins [BR:
cca02035
]
Flagellar system
Flagellar assembly proteins
Stator
CCA_00429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
Sigma70_ECF
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AAP05175
UniProt:
Q823I1
LinkDB
All DBs
Position
484199..484972
Genome browser
AA seq
257 aa
AA seq
DB search
MKTQNTQNISEIWELYWETQEIEYRDTLIDFYLHLVKCVVHRLISGMPSHVKTEDLYASG
VEGLVRAVERFDPEKSRRFEGYALFLIKAAIIDDLRKQDWVPRSVHQKANKLSEAMDTLR
QSLGREPTDGDLCEYFQISQQELSGWFISARPALIISLNEERPSLSDGESGVALEERIPD
ERAETGYDIVDKKEFSSFLANAIEGLEEKERKVMALYYYEELVLKEIGKILGVSESRVSQ
IHSKALIKLRAALSAFI
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacacaaaacacgcaaaacatttctgagatttgggaattatattgggaaacccaa
gagattgagtatcgagatactttgatcgatttttacctacatctagtcaaatgtgtagtt
caccgtttgatttcaggtatgccttcccatgtaaagaccgaagacctgtatgcttccgga
gtagagggattagtgcgcgccgtagagcgctttgatccagagaaaagtcgtcgtttcgaa
ggttacgccctgtttttaattaaggctgctattatcgatgatttaaggaagcaggattgg
gttcctagaagcgttcatcaaaaggcaaataagctttcagaggctatggataccttaagg
cagtctctaggaagggagcctacagatggagatctttgcgagtattttcaaatttcccaa
caagagctttccggatggtttatttcagcgcgtccggctttgatcatttccttaaatgag
gaaagaccttcactatccgacggagagtcgggtgtagctttagaagagcgcattcctgac
gaacgggcggaaacagggtacgatatcgtcgataaaaaagaattctcctcatttttagcc
aacgctatagagggcttagaggagaaagaacgaaaggtgatggctctatattattatgaa
gagctagttcttaaggaaattggcaaaattcttggagttagcgaatctcgcgtctctcag
attcattccaaagctttgattaaacttcgagcagctttatccgcctttatttaa
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