Chlamydia caviae: CCA_00676
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Entry
CCA_00676 CDS
T00125
Symbol
uvrA
Name
(GenBank) excinuclease ABC, subunit A
KO
K03701
excinuclease ABC subunit A
Organism
cca
Chlamydia caviae
Pathway
cca03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCA_00676 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cca03400
]
CCA_00676 (uvrA)
DNA repair and recombination proteins [BR:
cca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCA_00676 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CCA_00676 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
SMC_N
nSTAND1
UvrA_DNA-bind
AAA_29
AAA_16
AAA_21
RsgA_GTPase
DnaJ_CXXCXGXG
NACHT
AAA_25
Anti-TRAP
DUF7602
Motif
Other DBs
NCBI-ProteinID:
AAP05418
UniProt:
Q822K6
LinkDB
All DBs
Position
773526..778946
Genome browser
AA seq
1806 aa
AA seq
DB search
MPSLPVHISGITVRNLKNISIEFLPGEIVLLTGVSGSGKSSLAFDTVYAAGRKRYVATLP
AFFATNLSPLPDPTVEKIHGLSPTIAVKQNHFAYHAHSTVGSAAELSQHLALLFSLDGEA
RDPHTKQTLHLQSKEKILATLATIPEGTQVTILAPLINISRASIQECVRQGYTKIRIDNV
ISSIYPFLTSPLSEESPVAIVVDSFIKNESNNARMKVSLFSALDLGQGKCSISTETYEET
FSTQVYIPETQQTYAPLTPQVFSPHSLEDRCTQCQGSGIYITIDDPSLIQNDLSIRENCC
KLAGNCSTYFYHALYQSLADTLNFSLDTPWKDLPDSVQNAFLYGQKHLVLPVRLFDPTLG
KKPLSHKVWRGILNEIGEKVRYAAKPSKYIPEGTSATSCPTCQGTGIGEYACAATWQGKT
FVEFQKMPLDEFFSFTSSITPTLPSIREVLDGLNNRLSILINLGLSYLTPERTLATLSGG
EQERTALAKHLGAELSGITYILDEPSIGLHPRDTHKLIQVIQKLRDQGNTILLVEHDEQM
ISFADRIIDIGPGAGIFGGEVLFNGTPADFLKTCDSLTASYLRHELTIDIPVRRPKTKAR
LTLSHATINNLKDITISLPLERITAVTGVSGSGKSSLINDTLVPAMERVIQGDKDSHLCI
EEGTIERVVHITRDLPGRSQRSISLTYIKAFDDLRELFSQQPKSKRLGLTKGHFSFNLSL
GACTECQGIGSITLDNHTPIPCPLCHGKRFQPQILEVRYQGKNIADILAMTAYEAEKFFM
STPHIHEKIHALCSLGLDHLPLGRPLSSLSGGEIQRLKLTYELLAPSKKPTLYILDEPTT
GLHTHDIHALIHVLQSLTQQGHTVVVIEHNMHIVKIADYVIELGPEGGNLGGYLLASCTP
EELISLNTPTAKALQPYFKKTKALPKLAEKSQNRHLLKDISIQNAYHHNLKHIDITLPRN
ALTAISGPSASGKHSLVFDILYAAGNIAYAELFPYYVRQALIKQTPLPQVESVRGLSPVV
AIKKTGIRKNSRYSLASSLDITNGLEKLFALLGKPHCPLTGKPLKKITPQTIIDKLFQNY
ENSYVTITAPISPEEDLSIALEMKKKEGYLKLFANNEIYDLGEHLPEILEDPAIIIQHTK
ISKSHESSLLSSLTLAFSLSRTIRLHIHNQGKIQHSLSYTLGWQDSLGNSYPNITRKLLS
REHSEGQCQQCCGSGNVLKLSLTAHKDKILHYSPLDLFKLFFPDISPKRVVDLIRELKIS
SSTQIQDLDPPTQEKLFQGTQKHAGLERILMEQCNLVPFCPLLHPLILSDTCSGCSGWGI
HTYAQQVRIGETSLIDIYQEDTEFLKNLLMTLHDDQAQPIIQDLQNRLAFIDKVGLSYIT
LGQQQDTLSDGEHYRLHLAKKISTNLTDIVYLLEDPLSGLHPQDIPTLTKLLKELVTNNN
TVIATDRNHLLELCADHTINLGPGSGPQGGYLTNPLPSSIEDDDHKKVFSKDTLEVRLSI
HNISNLHVQAPLYSLVAIAGVSGSGKTSLLTEGFYKQAQKLIDTGNAHFSNVVFLDSHPL
SSSQRSDISTYFDIAPYLRNFYASLTQAKALNITASMLSTNTKHGQCSDCLGLGYHLIDR
AFYALEKRTCPTCSGYRIQPLSQEVVYEGKHFGKLLKTPIEEVLTIFPFLKRIQAPLQAL
IDSGLGYLPLGQNLSSLSLSEKISVKIARFLHLAPQEPSLFLLDEIATSLDVNKKCQLQK
LFRTLISQGHSIIYVDHDIQLLKHADYIIELGPGSGKYGGKVLFSGQPKDLATSKKSVLK
TYMSGL
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atgcctagcttacccgttcatatttctggtattacagttagaaatctaaaaaatatttct
atagaatttcttcctggagagattgtcttacttaccggggtatcaggatctggaaaatct
tcattagcctttgataccgtttatgcagcaggaagaaaacggtatgtagccactctacca
gcatttttcgctacgaatttatctcctctccccgaccccactgtagaaaaaattcacggt
ctttccccaacgattgctgttaagcaaaaccattttgcctatcatgcgcactctactgtt
ggaagtgccgcagaactctcccaacatcttgctttattattctcgctagatggagaagct
agagacccgcatacaaaacaaactcttcatttacaaagtaaggaaaagattctcgcgaca
cttgcaaccattcctgagggaacgcaagtgaccatcttagcaccgctgataaatataagc
agagcttccattcaagaatgtgtgcgacagggatacacaaaaatccgtatagacaacgtc
atttcttctatttatccctttctcacgtctccccttagtgaagagtcccctgtagctatt
gtcgttgattctttcattaaaaatgaaagtaacaatgcgcgtatgaaagttagcttattt
tctgctcttgatctaggacaagggaagtgttctataagcactgagacatatgaggaaact
ttttccacgcaggtatacataccggaaacccaacagacgtatgcaccattaacaccacaa
gtattttctcctcatagtctcgaagatcgttgtacacagtgtcaaggatcaggaatctat
attaccattgacgatccctcgcttattcaaaatgacctatctatccgagaaaactgttgc
aaactagcaggaaactgctctacgtacttttaccacgctctgtatcaatctctcgccgac
accttaaattttagtttagacactccatggaaggatcttcctgattctgtccaaaatgct
ttcctctatggtcaaaagcatcttgttcttcctgtacgcctttttgatcctacattagga
aagaaacccctatctcacaaagtttggagagggattcttaatgagattggcgaaaaagtc
cgttatgccgcaaaaccttcaaaatacattcctgaagggacatcagcaacgtcctgtcct
acatgtcaaggaaccggaattggagaatacgcttgtgcagctacatggcaaggaaaaact
tttgtagagtttcagaaaatgcctcttgatgagtttttttcttttacatcttctataaca
ccgacattaccctccattcgtgaagtcttagatggtttaaacaatcgcctttccatattg
ataaacttagggctttcctacctcaccccagaaagaacactcgcaacattatcaggagga
gaacaagaacgcacagctttggctaaacatttaggagctgagttatcaggaattacctat
attcttgatgagccctccataggactccatcctcgcgatacacataaactgattcaagta
attcaaaaattacgcgatcagggaaataccattcttcttgttgagcatgatgagcagatg
atctcttttgctgatcgcattatcgacattggtccaggagcggggatcttcggaggtgaa
gtactatttaatgggactcccgcagattttttaaagacttgtgattcactaacagcaagc
tatctgcgccatgaacttaccatagacatccctgtaagacgccccaagacaaaagcacgt
cttacactgtctcatgccacgattaacaacttaaaagacattactatttctctacctcta
gagagaataaccgcagtgacaggagtttcgggatcaggaaaatcttctttaattaacgac
actttagttcctgctatggaacgcgttattcaaggagataaggactcccatttatgtata
gaagagggcaccatagaacgtgtcgtacatattactcgagatctccccggccgttctcaa
cgttctatttctctaacctatattaaggctttcgatgatcttcgagaattattctcccaa
cagcctaaaagcaaacgcttgggattaacaaaaggtcattttagttttaatctctcttta
ggagcctgtacagaatgtcaaggtatagggtctataactcttgataaccatacccccatt
ccctgtcctctctgtcatgggaaacggttccaaccgcaaattttagaagtgcgctatcaa
ggaaagaatatcgctgacattttagcaatgacagcgtatgaagcggaaaaatttttcatg
tcgactccccatattcatgaaaaaattcatgctttatgctccttaggtcttgatcatctc
cctttaggaagacctttatccagcctatcaggaggagaaatccaaagattaaaacttacc
tatgagctactcgctccttctaaaaaacctactctttatattcttgatgaaccgacaaca
ggattgcatactcacgatatccatgctcttatccatgttcttcaatctcttactcaacaa
ggacatactgtagtcgttatagaacacaatatgcatattgtgaaaatcgctgattacgtt
attgaactaggtcctgaaggaggaaatctcggaggatatctcttagcctcatgcactcct
gaagaactaatttccctcaatacacctacagcaaaagctctgcagccatattttaaaaag
acgaaagctcttcctaaactagctgagaaatctcaaaataggcatcttctcaaagatatt
tctattcaaaatgcctatcatcacaaccttaaacatattgatattactcttcctcgcaat
gctctaacagcaatttcaggaccttcggcatcagggaaacattctttagtctttgatatt
ctttatgctgcaggaaatattgcttatgctgagctatttccctattacgtgcgccaagct
cttattaagcaaacccctctgccacaagtagaaagtgtccgaggattatctccagtcgtt
gcaataaaaaaaacaggaatacgaaaaaactcaagatattcgttagcgtcatctttagac
attaccaacggtcttgaaaaactctttgctctgctaggaaaacctcattgccccttaaca
ggaaaacctctaaaaaaaatcactccgcagacaattatcgataaacttttccaaaattat
gaaaattcttacgtcacaataaccgcgcctatatctcctgaagaagacctgtctattgct
ctagaaatgaagaaaaaagagggatatttaaagctatttgctaataatgagatttatgat
cttggagaacatcttcctgaaattctagaagatcctgccatcattatccaacatacaaaa
atctccaaaagtcatgaatcttctttgctatcctcattaacgttagctttttccttatca
cgaacaatacgcttacatattcataatcaggggaaaatacaacactctctatcttacact
ctaggttggcaagattccttaggaaacagctatcctaatatcacgcgcaaactcttatcc
cgagagcatagcgaaggacaatgtcaacaatgttgtggatcagggaatgttttaaaactc
tctttaacggcacataaagataaaattcttcattattcccccttggatctctttaagcta
tttttccccgatatttctccaaaacgtgtggttgatcttattagagaactgaagatttcc
tcatctacgcaaattcaagatctcgatccccctactcaagaaaaattatttcaaggaact
caaaaacatgcaggactagaaagaattctcatggaacaatgcaatcttgttcccttctgt
cctcttctccatcctctaattctatccgatacatgctcgggatgctcaggatggggaatc
catacctatgcgcaacaggtgcgcataggggaaacatctctcatagatatctaccaagaa
gataccgaattcctcaaaaatctgttaatgaccctccatgacgatcaagcgcaacctatt
atccaagatctacaaaaccgcttagcatttattgataaggttggattgagctacatcact
ctagggcaacaacaagacactttaagtgatggcgagcactaccgcctccacctagcaaag
aaaatctctacaaatcttacagatattgtttatcttcttgaagatcccctgtcaggactc
catcctcaagatattccaacattaaccaaattacttaaagaactcgttaccaacaataac
actgttattgctacagaccggaatcatctattagaactctgtgcggatcacacgataaat
ttaggaccaggatcaggacctcaaggaggatatctcaccaatccactcccatcatctata
gaggatgatgatcataaaaaagttttctctaaagacactttagaggttcgtctctcgatt
cataatatctctaatcttcatgtacaagctcctttgtatagtctcgttgccatcgctgga
gtgtcgggatctgggaaaacctcattactcaccgaagggttttataagcaggctcaaaag
cttatcgatactggaaatgcgcatttctcaaatgtagtgttcctagattctcatccgcta
tcttcttcacaacgatctgacatcagcacatattttgatattgctccatatttgaggaac
ttctacgcatcgctcacacaagccaaagccttaaatattacagcaagtatgctcagtaca
aatacaaaacatgggcaatgttctgattgcttaggcttaggataccacctaatagataga
gctttttatgctttagaaaagcgcacgtgcccgacatgttcaggataccgtattcaaccc
ctatctcaggaggttgtctatgaagggaaacacttcgggaaactcttgaaaactcctatt
gaagaggtcctgactatttttcctttccttaaaagaatacaggctcccctacaagctctc
atagactcagggcttggctatcttcctttaggccaaaatctctcttccctatctctaagt
gaaaaaatctctgtaaaaattgctcgattccttcacttggctcctcaagagccctcgcta
tttcttctagatgaaatagccacctccttagatgtgaataagaaatgccaattgcaaaag
ctatttcgcacgctgatatctcaagggcattctattatctatgttgaccatgacatacag
ctgttaaaacatgccgactatattatagaactgggacctggatcagggaaatacggagga
aaagtactcttttcaggacagcctaaagatcttgccacttctaaaaagtcagtactaaaa
acgtatatgagtggattataa
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integrated database retrieval system
