Chlamydia caviae: CCA_00918
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Entry
CCA_00918 CDS
T00125
Symbol
helZ
Name
(GenBank) helicase, Snf2 family
Organism
cca
Chlamydia caviae
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
DUF5364
Motif
Other DBs
NCBI-ProteinID:
AAP05657
UniProt:
Q821M2
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Position
complement(1060798..1064298)
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AA seq
1166 aa
AA seq
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MLNFRKLRRDFTANILQDGKELFDQGAVINAKILSMNGESVCIGAQVRGLYDNVYECEIE
VDRSKSDTIDSNCDCSYNYDCQHIVALLFYLEKYFNEMVVAYSQEADLETNQEINEEVKK
ELQETFVAAASREEERKDRAHQKEILSEYVHAANALSANPFFLPQEYLEKNSAELAVLFV
ASNDEVFRPNQHVEFQLVLRLPGRSKPFYISNIKTFLEGVLYQEPIILNGRRFFFTMQSF
NVSDRKLIDLLIRYVRYANQAPEEKLLKSAYLTLTSLGVILAKMYEHQMADRGGGQVGEK
ESFSGMFCGNLEEPLYWSASAAKMKFDLDFFDTPYKALLMTPLILVDDETLQPEQAILLE
SNVPGIIHNNVYHHFAPQIRRAHLRSFLRLRDITIPEALFGSFRENALPVFKEYAEVSNV
EVLNPFVTLPYVEDIRGVCNISYLDGELEAKLHFIYDSLTIPAASFALKYQDVHAFIRDD
GILARNLVEERKITEEVFSGFIYDERDGAFHVKSEKKIVEFMTETIPNNQHRITFNCPET
LSDQFIYDETVFDLSFKESSEVNTYEAELKVNGLLKGISLDLLWDCISAKKRFLELPKKG
RNVKTPRRGRASSTTKLPCILVLDLEKISPVVQIFNEIGFKVLDNFVEKCPLWSLTGISP
EIFKGLPVNFTMTDKLAEIQKQIRGEVAFDFQAVPEQIQATLRSYQTEGIHWLERLRKMH
LNGILADDMGLGKTLQAIIAITQSRLEKGKGCSLIVCPTSLVYNWKEEFRKFNPEFKTMI
VDGIPSHRRRQLAALSEYDVAITSYNLLQKDIDTYKDFVFDYVVLDEAHHIKNRTTRNAK
SVKMIRSGHRLILTGTPIENSLEELWSLFDFLMPGLLSSYDRFVGKYIRTGNYMGNKTDN
MVALKKKVAPFILRRMKEDVLEDLPPVSEILYHCHLTDSQKELYHSYAASAKKELSRLVK
QEGFDRIHIHVLATLTRLKQICCHPAIFAKDVPEPGDSAKYDLLMDLLSSLVETGHKTVL
FSQYTKMLSIIKKDLEARGVRFVYLDGSTKNRLELVNQFNEDPGLLVFLISLKAGGTGLN
LVGADTVIHYDMWWNPAVENQATDRVHRIGQNRSVSSYKLVTLNTIEEKILSLQNRKKSL
VKKVINSDDEVVSKLTWEEVLELLQI
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgcttaattttcgcaaattacgaagggattttacagctaatattttgcaagatggcaag
gaactttttgaccagggagctgtgattaatgcgaagatcctgtcaatgaatggagagtcg
gtgtgtataggagcacaggttcgaggtctatacgacaacgtatatgaatgtgaaatagaa
gttgatcgttcgaaatctgatactatagattctaactgtgattgctcttataactatgac
tgtcagcacatagtagcgctactgttttacttagagaaatatttcaatgaaatggtggtg
gcctactctcaggaggctgatttagagacgaatcaagaaataaatgaagaagttaagaaa
gagcttcaagaaacttttgtagctgctgcaagtagggaagaagaaagaaaagaccgtgcg
catcaaaaagaaatcttaagtgaatacgttcatgcagccaatgcgttgagtgcaaatcca
tttttccttcctcaggaatatttggaaaaaaattctgcagaacttgctgttttatttgtt
gcttctaatgacgaggtattccgtccgaatcagcatgtggaattccaattagttttacgt
cttcctggccgttctaagccattttatatttcaaatattaaaactttccttgaaggagtt
ttgtatcaagaaccgataatccttaatggtcgtcgtttcttcttcacaatgcaatctttc
aatgtttccgatcgcaaacttatagatttattgatccgttatgttcgttatgcgaatcaa
gcccctgaagaaaagttattgaaatcagcctatctgacgttgacatcattaggtgtgatt
ttggcaaaaatgtatgaacatcagatggcagatcgtggtgggggacaagtcggagagaaa
gaaagtttttcaggtatgttttgtgggaaccttgaagaacctttatattggtcggcttct
gccgctaagatgaagtttgatttagattttttcgataccccctacaaggcactattaatg
acgccattaattcttgtggatgatgaaactcttcagcctgaacaggcgattcttttagag
tctaatgtacctggaattatccacaataatgtctaccatcattttgctcctcagattcga
cgagcacatttacgttctttcttaaggctgcgagatatcacgattccggaagctttgttc
ggatctttccgggaaaatgcgcttcctgtgtttaaggaatacgctgaggtttctaatgtt
gaagttttaaatccctttgttactcttccttatgttgaggatatccgtggagtctgcaat
ataagttatttagatggggagttagaagcgaagttacattttatctatgattcgctcacg
attcctgcggcttcgtttgctttaaaataccaagatgttcatgcgtttattcgtgatgat
ggaattttagctaggaatcttgttgaagaacgtaagattacagaagaggttttctcaggc
tttatttatgacgagcgcgacggtgcttttcatgtaaaaagtgaaaagaagatcgtggag
tttatgacagaaacgatcccgaataatcagcataggattacatttaactgccctgagacg
ctctcggatcaatttatttatgatgaaacagtctttgatctttcctttaaagagagttca
gaagttaatacttatgaagccgagctcaaagttaatggcttactgaagggaattagctta
gacttactttgggattgtataagtgctaaaaagcgtttcctagagttgcctaagaaaggc
cgtaatgtaaaaactcctagaaggggtagagcttctagcactacgaaacttccatgtatt
ttagttttagatttagaaaagatctctccagttgttcagatttttaatgaaataggcttt
aaggttcttgataactttgtagaaaagtgtcctttatggagtttgacaggcatttctcct
gagattttcaaaggtttaccagtcaattttacaatgacggataaacttgctgagatacaa
aagcaaattcgtggagaagtcgcttttgatttccaagctgttcctgaacaaatacaggcg
acattgcgtagttaccaaacagaaggaattcactggttagagcgtcttagaaaaatgcat
ttaaacggtattcttgctgatgatatgggccttggaaagaccctgcaagcaattattgcc
attacacaaagtagattagagaagggaaagggatgttctctcatcgtctgtccaacatcc
ttagtatataactggaaagaagaatttcgcaagttcaatccagaatttaaaactatgata
gtggatggaattccttctcatagacgtagacagttggcagctttgtcggaatatgatgtt
gctattacttcttataatctgttgcaaaaggacatcgacacctataaggattttgtcttt
gactatgtagttttagacgaagcccatcatattaagaaccgcacgacgcgtaatgcgaaa
tctgtaaaaatgattcgttcgggacataggttaatcttaacaggtactcctatcgaaaat
tctctcgaagaattatggagcttgttcgacttcttgatgcctggtttattgagtagttac
gaccgctttgttggtaagtatatccgcacaggcaattacatggggaataagaccgacaat
atggttgctttgaagaagaaggtcgcgccatttattcttcgtcgcatgaaagaagatgta
ttggaagatttaccgcctgtttcagaaattctgtaccattgtcatcttacagattctcag
aaagagttgtaccattcgtatgctgcttcagcgaagaaagagctttctcgtttggttaaa
caagaaggattcgatcgtatacacatccatgttcttgcaacgcttacacgtttaaaacaa
atctgctgccatccagctatctttgcaaaagatgttcctgaaccaggcgattctgcaaag
tatgatttgctgatggatcttctttcttctcttgttgagacggggcataaaacggttctc
tttagtcaatacaccaagatgttaagcatcatcaaaaaagacctagaggctcgtggagtg
cgctttgtttatttagatggttccaccaagaacagattggagttagtcaatcagtttaac
gaggatccgggattactagttttcctgatttccttaaaagctggaggaacaggattgaac
cttgttggtgcggatacggtaattcactatgatatgtggtggaaccctgctgtagaaaat
caagctaccgatcgggtgcatcgtatagggcagaatcgctcagtgtcttcatataagcta
gttacgttaaataccattgaggaaaaaattctatctcttcaaaacaggaaaaagagcctt
gtaaagaaagtgatcaactctgatgatgaagtcgtttccaagttgacttgggaagaagtg
ctagaattgctacagatatga
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