Clostridium cadaveris: KQH81_00165
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Entry
KQH81_00165 CDS
T07934
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ccaa
Clostridium cadaveris
Brite
KEGG Orthology (KO) [BR:
ccaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaa03019
]
KQH81_00165
Messenger RNA biogenesis [BR:
ccaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KQH81_00165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
UFH65030
LinkDB
All DBs
Position
42136..43092
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AA seq
318 aa
AA seq
DB search
MDCLRIKDFNQGMRIDGIYLIKSLDFKTTNSNNKKYIDLYLCDKTGEINAKFWDAKDEDK
DRLKESFLAKVSGVVLAWQGSLQLKIDSISNLEDMEGIDLEEYVQCAPYRSEDMVDAIYE
YINSMKNKELKDITSYFIEENKEKLMYYPAAKKNHHALRGGLLYHTLTMLKSGEALSSIY
TFLNKELLYAGIILHDMCKMDEMDSNTLGFVKEYSVQGQLLGHISLGVGKIEYVGESLGI
SKEITMLLKHMVLSHHYEPEYGSPIKPMIPEAEMLHYLDIMDARMYDMEKALKSTSVGDF
SERIWSLENRKVYKPNLE
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggattgtttgagaataaaagattttaatcaaggaatgagaattgatggaatatatctt
ataaaatcgttagattttaaaaccaccaattcgaataataaaaaatatatagatttatat
ttgtgcgataagactggggaaataaatgcgaaattttgggatgcaaaagatgaagataaa
gatagattaaaagaaagttttttagcgaaggtttctggagttgttcttgcatggcagggt
tctctccagttgaaaatagattcaataagtaatttagaggatatggaaggtatagactta
gaagaatatgttcagtgcgcaccttatagaagtgaggatatggtcgatgctatatatgaa
tatataaattccatgaaaaataaagagcttaaggatataacgagttattttatagaagaa
aataaagagaaacttatgtattatccagcagcaaaaaagaatcatcatgcgttaagagga
ggacttctatatcatacacttacaatgcttaaaagcggagaagcattgagcagtatatat
acttttttaaataaagagctgctatacgcagggattatactacacgatatgtgtaagatg
gatgaaatggatagtaatactttaggatttgtaaaagaatattcagttcaaggtcaattg
cttgggcatatatctttaggagttgggaagatagaatatgttggagaaagtttggggata
tctaaagaaataacaatgcttttaaagcatatggtgttgtcccatcattatgaaccagag
tatggaagtccaataaaacctatgataccagaagcggaaatgcttcattatttagatata
atggatgcaagaatgtatgacatggaaaaggcacttaaatcaacttcagttggagatttt
tcagagagaatttggtccttagaaaacagaaaagtatacaaaccaaatctagaataa
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