Clostridium cadaveris: KQH81_00805
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Entry
KQH81_00805 CDS
T07934
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ccaa
Clostridium cadaveris
Pathway
ccaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KQH81_00805 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaa03019
]
KQH81_00805 (recQ)
03400 DNA repair and recombination proteins [BR:
ccaa03400
]
KQH81_00805 (recQ)
Enzymes [BR:
ccaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KQH81_00805 (recQ)
Messenger RNA biogenesis [BR:
ccaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KQH81_00805 (recQ)
DNA repair and recombination proteins [BR:
ccaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KQH81_00805 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
Helicase_Sgs1
RecQ-1-like_HTH
Motif
Other DBs
NCBI-ProteinID:
UFH65145
LinkDB
All DBs
Position
complement(178319..180478)
Genome browser
AA seq
719 aa
AA seq
DB search
MEKALQYLKEYFGYTSFRRGQAEAINDILNGHDTFVLMPTGGGKSIIYQIPALIFDGLTI
VISPLISLMKDQVDTLNSMGINSTYINSTLSSSEIEQREMDIKNNKYKLLYIAPERLEAL
KFFLGTNDIDVSLIAIDEAHCVSQWGHDFRPSYRNISSFISLLPSNPIVLACTATATEIV
KNDIVTLLGLRNANLYCTGFNRENLNFKVFRGENKESFILDYVNAHTEETGIIYTATRKS
TEHLYSVLMKKGFKAGLYHGGLSEEKRKEMQDAFMFDDINIMVATNAFGMGIDKSNVRYV
IHNNMTKNLEAYYQEAGRAGRDGENSECILLFSSGDIQTQKFFIDNSPLPPNIKMQEYNN
LRAMVDYCYTSKCLRSYILNYFGEESESNCNNCSNCNEDNELKDVTNEAMMIFSTIYRIK
ERFGITVVIDVLKGSQNQRMISLGFDKLSTHGLMSKYDRKFIEEVINKLIAENFLASTDE
EFPRVVLTPKAIAAIKNKENVFLSFRKQLKKAKNDSKGLHKDLLIKLKELRRALSEELQV
PPYIIFHDTTLKEMSDKLPRTKEDFLEIKGVGLGKFEKYGEKFLDAIREYIAYANISEVA
LSESASINKNIPDPSKDSSEPVKEKSHIITLNLYNQGQSLDEISENRNLSITTVQEHIIH
CALEGEKVNLDDFIPDGTEDIILSAIEELGASKLKPLKDVLPKNIGYMTIKAVICKHQL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagcacttcaatatttaaaagaatactttggctataccagctttagacgtggt
caggctgaagctataaatgatatattaaatggtcatgacacctttgttttgatgcctaca
ggcggcggtaaatccatcatatatcaaataccagcccttatttttgatggacttactata
gtcatctctccacttatctcccttatgaaagatcaagtggacacattaaattctatggga
ataaactcaacatatataaacagtactttgagctcttcagagattgagcagcgtgaaatg
gatataaaaaataataagtataaacttctttatatcgctcccgaaaggcttgaagcctta
aaattttttctaggtacaaacgatatagatgtttccttaatagctattgatgaggctcac
tgtgtttctcaatggggccatgattttaggcccagctatagaaatatctcttcatttatt
tctcttttacctagcaatccaatagtattagcttgcacagctactgctactgagatagta
aaaaatgatatagttactctcttaggccttagaaacgcaaacttatactgtacaggtttt
aatagggaaaatcttaacttcaaggtatttagaggtgaaaataaggaaagctttatactc
gattacgtgaatgctcacacggaagaaacaggaataatatatactgctacaagaaaaagt
acagaacatctttactctgttctcatgaaaaaaggctttaaagctggattatatcatggt
ggactttctgaggaaaagcgtaaagaaatgcaggatgcttttatgtttgatgatataaat
attatggttgcaactaatgcatttggtatgggaatagataagtcaaatgttcgatacgta
atccacaacaatatgactaaaaatctagaggcttattatcaggaagcaggacgtgctggt
agagatggtgaaaacagcgagtgcattcttctgttttcttcaggagacattcaaactcaa
aagtttttcatagacaattcaccccttccccctaatataaagatgcaggaatataataat
ctacgtgctatggttgattactgttatacatcaaagtgcttaagatcttacatactaaat
tattttggcgaagaatctgaatcaaactgtaacaactgtagtaattgcaatgaagataac
gaacttaaagatgtcacaaatgaagcaatgatgatattctcaactatatatcgaataaaa
gagagatttgggataacggttgttatagatgtacttaaaggctctcaaaatcaacgtatg
atttcacttggatttgacaaactttctactcatggacttatgagcaaatatgatagaaaa
tttatagaggaagtcataaataagctaatagctgaaaacttcctagcttctaccgatgaa
gagtttcctcgggtggttttaacccctaaagctatagctgctataaaaaacaaggagaat
gtattcttatcattcagaaaacagcttaaaaaggctaaaaatgattcaaagggattgcat
aaagatctgttaattaagcttaaagagcttcgtagagctttatctgaggaacttcaagtt
cctccatatataatctttcacgatactacattgaaagaaatgagcgataaacttcctaga
acaaaggaggatttcttagaaataaaaggtgtaggtcttgggaaatttgaaaaatacgga
gaaaaatttctagatgccataagggaatatatagcatatgctaatatctctgaggtagct
ttaagcgaatcagcttcaatcaataaaaatatacctgatccttctaaggactcttctgag
cctgtaaaggaaaaaagtcacataataactttaaatttatataatcaaggtcaatcatta
gatgaaattagtgaaaatagaaatctctctataaccacagttcaagagcacataattcat
tgtgcattagagggagaaaaagttaatctagatgactttataccagatggcaccgaagat
atcatattatcagccatagaggaactaggtgcttcaaaattaaaaccattaaaagatgtc
cttcctaaaaatataggatacatgacaataaaagctgtaatctgtaagcatcagctttaa
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