Clostridium cadaveris: KQH81_01015
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Entry
KQH81_01015 CDS
T07934
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ccaa
Clostridium cadaveris
Pathway
ccaa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccaa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KQH81_01015
09124 Replication and repair
03420 Nucleotide excision repair
KQH81_01015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaa03021
]
KQH81_01015
03036 Chromosome and associated proteins [BR:
ccaa03036
]
KQH81_01015
03400 DNA repair and recombination proteins [BR:
ccaa03400
]
KQH81_01015
Enzymes [BR:
ccaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
KQH81_01015
Transcription machinery [BR:
ccaa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KQH81_01015
Chromosome and associated proteins [BR:
ccaa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
KQH81_01015
DNA repair and recombination proteins [BR:
ccaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KQH81_01015
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
Helicase_C
ResIII
PhoH
Motif
Other DBs
NCBI-ProteinID:
UFH65177
LinkDB
All DBs
Position
216631..218940
Genome browser
AA seq
769 aa
AA seq
DB search
MYKLKVIKMKIINISVRELVEYVLRSGSIDSTFRGTSSMQEGIKAHKKIQDSQGENYTKE
VTLKEEVKYRDFVFKIEGRCDGLIQELQGITIDEIKSTARNLGDIEVDYNPLHWAQGQIY
GYIYGIQNNLLSINIQLTYVNIEDYEEKRFLKTFSIKELQKFLEGLLDKYLELAELKADI
EEKRDISIKSLEFPFKNYRKGQREMAVKVYRTIIDEKRLFVKAPTGIGKTISTIFPAVKS
MGEGLAEKIIYLTAKTITRTVAEDTFKMMKEKGLYMKVLTLTAKEKICFNEEVNCTKEGC
RFANGYYDRLNMGIVDILKNEDMISREIIERYSRKYDLCPFEFSLDVSIFVDAIICDYNY
VFDPRVSLKRYGDEDYKNYIVLIDEAHNLVDRAREMFSSTIEKRKVMDIKKLFKDKDKKL
YKTASEINKILIDIRNDDEREYSTYTEKPKDLIMKLVSFTTSAERWLAENPKKHGYNELL
DLYFEFNSFIRISKLYDDRFTTFVERSRNDVKIKLFCLDPSKLLNDITKENKATIFFSGT
LSPLTYFIDVLGGEESDYKIILKSPYDRENLSLYIYPLSTRYRHRKMTYKDISRMISNTI
REHPGNYLIFFPSYSYMNYVYENFLYYNENLKTIIQEKDMSEEDREDFLNNFSKDTEKNV
VGFGVMGGIFSEGIDLKGDRLKGAIIVGVGLPQICPERDIIKEYYNEEGKDGYDYSYVYP
GMNKVMQAAGRVIRTEDDKGTVVLIDDRFLSQKYLDMMPYEWRHFKVIR
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgtataaattaaaggtgataaaaatgaaaattataaatatttccgttcgtgagttggtg
gagtatgttcttagaagtggcagtatagattctacttttagaggaacctcttctatgcag
gaaggaataaaagcacacaaaaaaatacaggatagtcaaggtgaaaattacacaaaagaa
gtgactttaaaagaagaagttaagtatagggatttcgtatttaaaatagaaggacgatgt
gacggattaatacaggaacttcaaggaatcactatagatgaaataaaatccacagctaga
aacctaggagatatagaagtggattacaatccacttcattgggctcaaggacaaatttat
gggtacatatatggaattcaaaataatttattatcaataaatatacagcttacttatgtg
aatatagaggattatgaggaaaagagatttctaaaaactttttcaataaaggagttacag
aaatttttagaaggccttttagataaatatctcgaattggcagagttaaaagctgatatt
gaagagaaaagagacatttccataaaatcattagaatttccctttaaaaattatagaaaa
ggccaaagagaaatggcagtaaaggtatatagaaccatcattgatgaaaaaaggctcttt
gtaaaagcacctactgggataggaaagacgatatctactatatttccagcggtaaagtca
atgggagaaggattggcagaaaagataatatatcttacagctaaaactataacaagaact
gtagcagaagatacttttaaaatgatgaaggaaaagggtctttatatgaaagttcttact
cttacagcaaaggaaaaaatatgttttaatgaagaggttaattgtacaaaggaaggctgt
cgatttgctaatggttattatgacagattgaatatggggatagtggatatactgaagaat
gaagatatgataagcagagaaatcatagagagatattcaagaaaatacgatctttgccct
tttgaattctctttagatgtttctatctttgtagatgctataatatgcgattataattat
gtgtttgatccacgggtatccctaaagagatatggagacgaagattacaagaattatata
gttcttattgatgaagcgcacaacttagtagatagggcaagggaaatgttttcttcaacc
atagaaaaaagaaaagtaatggatattaaaaagctttttaaggataaagataaaaaacta
tataaaactgcaagtgaaataaacaaaatacttatagatataagaaatgatgatgaaaga
gaatattctacatatacagaaaagccaaaggatttaataatgaaattagttagttttaca
acttcagctgaaaggtggcttgctgagaatcctaaaaagcatggttacaatgagctttta
gacttgtattttgagtttaattcttttataagaataagcaaattatacgatgataggttc
actacttttgtagaacgtagcagaaatgatgtgaagataaaactattttgtttagatcca
tctaaattgttaaatgacataacgaaagaaaataaggctaccatatttttttctgggaca
ctttcaccgttgacttattttatagatgtgttgggcggagaggaatcagactataagatt
attttaaaatcgccttatgacagagaaaatcttagtttatatatttatcctttatcaacg
agatatagacatagaaaaatgacttataaggatataagcagaatgatatctaatacaata
agagagcatccaggaaattatttgatattctttccgtcctatagttatatgaattatgta
tatgaaaattttctttattataatgaaaatttgaagactataattcaagaaaaagatatg
agtgaggaagatagagaggattttttaaacaatttttctaaagatacagagaaaaacgtt
gttggatttggggttatgggtggaatattttcagaaggaatagatcttaaaggtgatagg
cttaaaggcgctattatagttggagtgggacttccacagatatgtccagaaagagatata
ataaaagaatactataatgaagaaggaaaagacggatatgactattcttatgtatatcct
ggaatgaataaagttatgcaggctgctggaagggttataagaacagaagatgataaagga
actgtagtgctcatagatgatagatttttaagccagaaatatttagatatgatgccttat
gaatggagacattttaaagtgataagataa
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