Clostridium cadaveris: KQH81_02540
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Entry
KQH81_02540 CDS
T07934
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ccaa
Clostridium cadaveris
Pathway
ccaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KQH81_02540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaa03400
]
KQH81_02540
Enzymes [BR:
ccaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KQH81_02540
DNA repair and recombination proteins [BR:
ccaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KQH81_02540
Prokaryotic type
KQH81_02540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UFH65442
LinkDB
All DBs
Position
complement(567916..568590)
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AA seq
224 aa
AA seq
DB search
MEILKNDWKDLLEDEFKSSYYLNLRKFLISEYKSNIVYPNMYDIFNALHYTPYNKVKVVI
LGQDPYHGPNQAHGLSFSVKPGVPAPPSLVNIYKELHTDLNCYIPNNGYLKKWADQGILL
LNAVLTVRAGEANSHRNKGWENFTNKIIELVNSKTEPVVFILWGKNAQEKQALITNPIHH
IIKSVHPSPLSASRGFFGSRPFSKTNEYLKADGIDPIDWQIENI
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggaaattctaaaaaatgattggaaggatcttttagaggatgaattcaaaagttcttat
tatctaaaccttagaaagttccttatatcagaatacaaaagcaatatcgtatatccaaat
atgtatgatatttttaatgctctgcattatactccttataataaagttaaagtggtcatt
ttaggtcaagacccttaccatggtccaaatcaagctcatggattaagcttttctgtaaaa
ccaggagttcctgcccctccatctcttgttaatatttataaagagcttcatactgacctt
aattgctacataccaaataacggatatctaaaaaaatgggcagatcaaggaattcttctc
ttgaatgcagttcttactgtaagagctggtgaagctaattctcatagaaataaaggttgg
gaaaacttcactaacaagataattgaattggtaaatagtaaaacagaacctgttgtattt
attctgtggggtaaaaatgcacaggagaagcaagctcttataacaaatccaatacatcat
attataaaatctgtgcatcctagtccactttctgcatctcgtggattctttggaagcaga
cctttttctaagactaacgagtacttaaaagctgatggtattgatccaatagattggcag
atagaaaatatataa
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