Clostridium cadaveris: KQH81_03130
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Entry
KQH81_03130 CDS
T07934
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ccaa
Clostridium cadaveris
Pathway
ccaa03030
DNA replication
ccaa03430
Mismatch repair
ccaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KQH81_03130
03430 Mismatch repair
KQH81_03130
03440 Homologous recombination
KQH81_03130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccaa03032
]
KQH81_03130
03400 DNA repair and recombination proteins [BR:
ccaa03400
]
KQH81_03130
Enzymes [BR:
ccaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KQH81_03130
DNA replication proteins [BR:
ccaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KQH81_03130
DNA repair and recombination proteins [BR:
ccaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KQH81_03130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
MotCF
At5g48480-like_N
Motif
Other DBs
NCBI-ProteinID:
UFH65552
LinkDB
All DBs
Position
706063..709659
Genome browser
AA seq
1198 aa
AA seq
DB search
MSSNFCHLHVHTEYSLLDGAGKISKLIDKAKELGMDSLAITDHGVMYGCVEFYKEAVSKG
IKPIIGSEIYIVPKSMHIKEHNPDNENYHLVLLVKNSKGYDNLMDIVSKASLEGFYYKPR
IDHDYLKSHSEGLIALSACLGGEVQSHINKGRLEKAKEAAVFYKSVFGPDFYLELQDHGI
EEQKKVNEELLKMSKELQIPLVATNDVHYINKEDAKAHDILLCIQTGKTIEDENRMRYPW
QQFYLRSEEEMRELFPYAQEAIDNTQKIADMCQFDYEFHKSKLPKFPLDEGIDPFEYLRD
LCYKGLAERYGCIRPILKDEKIDYEKAEQIKKEDDEAAHLIERLEYELGVINQMGYVDYF
LIVWDFIKFSYDNGIPTGPGRGSGAGSIVAYTLGITKIDPIKYGLIFERFLNPERVSMPD
IDSDFCYERRQEVIDYVVRKYGANNVSQIITFGTMAARGCIRDVGRAMNYSYGEVDKVAK
MIPSVLNITIDKALDMNKELKDLYDGDMRIKELIDVSRSLEGLPRHTSTHAAGVVIASQP
LVSYVPLQRNEEMVVTQFPMGTLEELGLLKMDFLGLRTLTVMRNAIEMIEENRGVKINLD
DLGFDDPKVYKMIGEGKTVGVFQLESPGMTSFMKELKPDNLEDIIAGISLYRPGPMAEIP
RYIEGKRNPDSVTYETPELESILNVTYGVMVYQEQVMEIVRKLAGYSMGRSDLVRRAMSK
KKHKVMEEERKNFINGIVNEDGTVEVPGCVRNGISPEAANQIFDQMMDFASYAFNKSHAA
AYAVVGYETGYLMRYYPVEFIAAMLNSIMGQNEKAAYYIAFAEGLGIQVLPPDINESYTK
FTVKGDTIRFGLGAIKNVGFNVVESIVEARNSKGRFKSLYDFCNKVDLGTVNKRAIESLI
KAGALDEFKIYRSQMLAVYEKIMDGIAGQKKRNIEGQMSLFGGNEEVETTTTIPFPNIKE
FEKKYKLAMEKEMTGLYITGHPLDDYESSLKFQTSITLGKIMEEYNEYFGGMTLEEDEAI
VTSTNVVKEIEASIQDNQRVKVGGILSEVNRKITRNNSMMAFLRLEDLTGDLECIVFPKA
YDKLMTLLQVDEMVVIEGRLSLKEDELPKVICENIYPLEKVDSQKLYIAIPEYKEFASIK
NKLRFICEKHKGLTPLFIFSRKEKQKYMLSKDFWVDADSDLMEELRKVFGEENIKILN
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaatttttgtcatcttcatgtccataccgaatattcccttttggatggggca
ggaaaaatatcgaagcttatagataaggcaaaagagcttggaatggatagccttgccata
acagaccatggtgtcatgtatggctgcgttgaattctataaggaggcagttagtaaagga
ataaaacctataataggttctgaaatatatatagtacctaagagtatgcacataaaggaa
cataatccagataatgaaaattatcatttggttcttttagtgaagaattctaaaggatac
gataatcttatggatatagtttcaaaggcatctcttgaaggtttctattataagcctaga
atagaccacgattatcttaagagccatagtgaaggacttatagctttaagtgcatgtctt
ggaggtgaggtccaaagccatataaataaaggaagacttgaaaaagcaaaagaagcagca
gtattttacaaaagtgtttttggaccagatttttatttagaacttcaagaccatggtata
gaggaacagaaaaaagtcaatgaagagcttctaaagatgtcaaaggaactccaaatacct
ttggtagcaacaaatgacgttcactatatcaataaagaagatgctaaggctcatgacata
cttttatgtatacaaacaggaaaaacaatagaagatgaaaatagaatgaggtatccttgg
cagcagttttacctaaggtctgaggaagagatgcgtgagctgttcccatatgctcaagaa
gctatagacaacactcagaaaatagcagatatgtgtcaatttgattatgagttccacaaa
tcaaagcttccaaaatttcctttagatgaagggatagacccttttgaatatcttagagac
ttatgttataaagggctggcagaaagatacggttgtattagacctatattgaaagatgaa
aaaatagactatgaaaaagcagagcagataaaaaaagaagatgatgaagcagcccatctg
atagaaagattagaatatgagcttggtgtaataaaccaaatgggttatgtagattatttt
cttatagtatgggatttcataaagttttcttatgataacggcatacctacgggtccgggg
agaggctctggagcaggatcaatagtagcttacacattaggaataaccaagatagaccct
atcaaatatggacttatctttgagagattcctaaacccagagagagttagtatgccagat
atagatagtgacttctgttatgaaagaagacaggaagttatagactacgttgtaagaaaa
tatggtgcaaacaatgtatcacagataataacttttggtactatggcagcaagaggatgt
atcagagatgtaggaagagctatgaattattcctacggagaagtagataaagtagcaaag
atgataccatcagtgcttaatataactatagataaagctctagatatgaataaagagctt
aaggatctttatgatggagacatgaggataaaggaacttatagatgtgagcagaagcctt
gaaggacttcctaggcatacatcaactcatgcagcaggtgttgtaattgcgtcacaacca
ttagtgtcctatgtaccgcttcagagaaacgaagaaatggtagttactcaattccctatg
ggaacattagaagagcttgggcttttaaagatggactttttgggacttagaactcttact
gtaatgagaaatgctatagagatgatagaagaaaaccgaggggtaaaaatcaatcttgat
gatttaggctttgatgaccctaaggtatataaaatgattggtgaaggaaagactgtagga
gtattccagctggaatctccaggaatgacatctttcatgaaggaacttaaacctgacaat
ctagaggatataatagctggaataagtttgtacagaccaggaccaatggcggaaattcct
aggtatatagaggggaagagaaatcctgattcagtaacttacgaaactccagagcttgaa
agcatacttaatgtaacatatggtgttatggtgtatcaagagcaagttatggagatagtt
agaaaacttgctggatactctatgggacgaagtgaccttgttagaagagctatgtccaag
aaaaagcacaaggttatggaagaggaaagaaaaaatttcataaatgggatagtaaatgag
gatggtactgttgaggtcccaggttgtgttaggaatggaatatctcctgaagcagcaaat
caaatctttgatcagatgatggactttgcaagctatgcattcaataaatctcatgctgcg
gcttatgctgttgtaggatatgagactggatatcttatgagatattatcctgtagagttt
atagctgccatgctgaatagtataatgggtcagaatgaaaaggctgcttactatatagca
tttgcagaaggccttggaatacaagtacttccaccagacattaacgagagttatacaaag
ttcactgttaaaggagacactataaggtttggtcttggagctataaaaaatgttggattt
aatgttgtagaatctatagtagaggcaagaaactcaaaaggacgtttcaaaagcctgtat
gatttttgtaacaaagtagatcttggaactgtaaataagagagctatagaaagcttaatc
aaagctggagcattagatgaatttaaaatatataggtctcaaatgcttgcagtttatgaa
aaaataatggatggaatagcaggtcagaaaaaaagaaatatagagggccagatgagctta
tttggtggaaatgaagaagtagagactacaactacaattccatttccaaacataaaagaa
tttgaaaaaaaatataagcttgctatggaaaaagaaatgacaggactttatataaccggt
catcctttagatgattatgaaagcagcttaaagtttcagacatcaataactttaggtaaa
ataatggaagaatataacgagtattttggcgggatgacattagaagaagatgaagccatt
gtgacatccactaatgtagtaaaagaaattgaagcgtccatacaggataatcaaagagtt
aaagtcggaggaatactctcagaagtaaatcgaaaaataacaagaaataattctatgatg
gcatttcttagattagaagatctgactggagatttggagtgcatagtatttccaaaagct
tatgataagctgatgactcttcttcaggtagatgagatggtagtcatagaaggaagatta
tcattaaaagaagatgaacttccaaaagttatatgtgagaatatatatccattagagaaa
gtagatagtcaaaaattatatatagctatacctgaatataaggaatttgcttcaataaaa
aataaattgaggtttatatgtgagaaacataagggattaactccacttttcattttttcc
agaaaggaaaaacaaaaatatatgctcagcaaagacttttgggtggatgcagactctgac
ttaatggaagaactacgaaaagtttttggcgaagaaaatattaaaattttaaattaa
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