Clostridium cadaveris: KQH81_07620
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Entry
KQH81_07620 CDS
T07934
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ccaa
Clostridium cadaveris
Pathway
ccaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KQH81_07620 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaa03400
]
KQH81_07620 (priA)
Enzymes [BR:
ccaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KQH81_07620 (priA)
DNA repair and recombination proteins [BR:
ccaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KQH81_07620 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
ResIII
DEAD
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_19
Cas3-like_C_2
PIF1
Zn_ribbon_6
T2SSE
SLFN-g3_helicase
DUF7129
NPHP3_N
nSTAND3
DUF6892
SRP54
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
UFH66377
LinkDB
All DBs
Position
1640154..1642358
Genome browser
AA seq
734 aa
AA seq
DB search
MKNYAGVIINSESIQLDRIFTYKIPEKFKENIAIGMWVKVPFGKGSKIIDAFVVELYDEI
EDKGFRIKEIKTLGENIELFTEDDLKLIKYMREMYLCTYLEAIRVFIPRGILKGLTHKEK
DVVSCGNEEIPAKYNKEPYKSIIEAVKANQGKYSARELSKVFKFSLSSINTLIKNDVLLK
STQTVYRYNDRDYEAYKAKILNHEQYEVFREVVTSEENIFLLKGVTGSGKTEVYMKIIEH
YMRMGKNAIMLVPEIALTPQMVERFKGRFGKDVAVFHSKLSDGERFDEWYRVKNGEVKIA
VGARSAIFLPFKDLGVIIIDEEHESSYKSESNPKYNAKDIAEFKSNICGCKVILGSATPC
VETYHKTFNKEIKLLTLHKRADGAEMPPIEIVDMREELKNGNKSMFSSSLKKAMDEALKR
DEQIILFLNRRGFSSFVSCRKCGYVFKCKNCDISMTYHMGGYLSCHYCGSREPIRKTCPS
CGSTYVKQFGVGTEKVERALHVEYPDVSIIRMDFDTTRTKDAYERIYTDFKEKKASILIG
TQMVAKGLDFPDVTVVGVLAADLSLNMPDYKAGERTYQLLTQVAGRAGRGKKKGKVIVQS
YLPGNYAITHSKNYDYEGFYRDEISLRAMMKYPPFVKIMVLNFSSKNEGMLIKNIQNIGI
NLKNRLKIQENIEILGPCPCMVSKIKEMYRWQIIIKGYISVDLANFIKNFTYNELGECYN
DIRISIDINPNSLI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattatgcaggtgttataataaacagtgaatcaattcagttggataggatattt
acttataaaattcctgaaaaatttaaagaaaacatagctatagggatgtgggtaaaagta
ccttttgggaagggaagtaaaattatcgatgcatttgtagtagaactttatgatgaaatt
gaagataagggctttagaataaaagaaataaaaactttaggagaaaatatagagcttttt
acagaggatgatttaaaactcataaaatacatgagagaaatgtatctttgcacttacctg
gaagctataagagtatttattccaagaggaattttaaagggacttacccataaggaaaaa
gatgtagtaagttgtggcaatgaagaaataccagctaaatataacaaggaaccctataag
tcaataattgaggcagtgaaagccaatcaggggaaatatagtgctagagaacttagcaag
gtttttaaattctctttaagctcaataaatactttaataaagaatgatgtattattgaag
tctactcagactgtatatagatataatgatagagattatgaagcttataaggctaaaatc
ttaaatcatgaacaatatgaagtgtttcgagaggttgtaacttctgaagaaaatatattt
cttttaaaaggagttacaggaagtggaaaaacagaagtatatatgaaaataatagagcat
tacatgagaatgggaaagaatgcaattatgcttgttccagaaatagccttgacacctcaa
atggttgaacgttttaaagggcgttttggaaaagatgttgctgtattccatagtaaactt
tcagatggtgagcgatttgatgagtggtatagggtaaaaaatggagaagtaaaaattgca
gtaggagcaagatcggctatttttctcccatttaaagatttaggagtaattataatagat
gaagaacatgaaagcagctataaatctgaaagtaatcctaaatataatgctaaagatata
gcagaatttaaaagcaacatttgcggatgtaaggtcattttaggctctgcaacaccatgt
gtggagacatatcacaaaacatttaataaagaaataaaacttttgacactacataaaagg
gctgatggagctgaaatgcctcctatagaaatagttgatatgagagaggaattaaaaaac
ggaaataaatccatgtttagttcttccttgaaaaaagctatggatgaagctttaaagagg
gatgaacagataatattatttttgaatagaagaggattttctagttttgtatcttgtaga
aaatgcggatatgtatttaaatgcaaaaactgtgatatatccatgacttatcatatggga
ggttatttatcctgtcattattgcggtagcagagaacctataagaaaaacatgtcctagt
tgtggaagtacatacgtaaagcaatttggagttggtacagagaaggttgaaagagctctt
catgtagaatatccggatgtgtctataatacgtatggattttgatactacaagaaccaag
gatgcttatgaaagaatatatactgatttcaaagaaaaaaaagcaagtatacttatagga
actcaaatggtagccaagggacttgatttcccagatgtcacagtggtaggagttttggct
gcagatttatccttgaatatgcctgattataaagctggagaaagaacatatcagctttta
actcaggttgcaggaagagcaggaagaggaaagaaaaaaggaaaagtaattgttcaaagt
tatcttcctgggaattatgctataacacattccaagaattatgactatgaaggtttctat
agagatgaaatatctcttagagcaatgatgaaatacccaccgtttgtaaaaataatggta
ttaaattttagttctaaaaatgaaggaatgttaataaaaaatatacaaaatatcggaata
aatttgaaaaatagattaaaaatacaagaaaacatagaaatattaggaccatgcccctgt
atggtttcaaaaattaaagaaatgtataggtggcagataataattaaaggttatatatca
gtagatttagccaattttattaaaaattttacttataatgagcttggggaatgctataat
gatataaggataagtattgatataaatcctaatagtctaatataa
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