Clostridium cadaveris: KQH81_08090
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Entry
KQH81_08090 CDS
T07934
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccaa
Clostridium cadaveris
Brite
KEGG Orthology (KO) [BR:
ccaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccaa03032
]
KQH81_08090 (topA)
03400 DNA repair and recombination proteins [BR:
ccaa03400
]
KQH81_08090 (topA)
Enzymes [BR:
ccaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KQH81_08090 (topA)
DNA replication proteins [BR:
ccaa03032
]
Prokaryotic type
DNA Topoisomerases
KQH81_08090 (topA)
DNA repair and recombination proteins [BR:
ccaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KQH81_08090 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
AF2212-like
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UFH66468
LinkDB
All DBs
Position
1723758..1725842
Genome browser
AA seq
694 aa
AA seq
DB search
MGHNLVIVESPAKAKTIGKYLGKNFVVEASMGHVRDLPKSQLGVDIENNYNPKYITIRGK
GELLDKLRRLAKKSDKIYLATDPDREGEAISWHLANVLKIDNKEKCRIEFNEITKNAIKS
SIKNPRTINENLVDAQQARRVLDRLVGYEISPILWKNIKWGLSAGRVQSAALKLICDREE
EIEKFIPKEYWTIDCELKKDKQKFIVKLSHKKGTKIEISNEEETNKIIGELKANEFKVDK
VKKYIKTKNPLPPFTTSTLQQDAYRKLNFQTKRTMSIAQQLYEGIDVKGHGTLGLITYMR
TDSVRISQEAQEAAAEFIKERFGEKYAPESFRNYKGKKNIQDAHEAIRPTYIEITPEMVK
DSLKGEQYKLYSLIWNRFMASQMSSAQLNAYSVDILNGEYKLKASGSSIKFNGFMKVYEY
VVDEDEENTKLPELEESEVLESSNVAGKQHFTQPPARFTEASFVKTMEEKGIGRPSTYVP
TITTILSRKYVDREKKSLIPTELGKIVNSVMEQYFNEIVDLEFTADMEMKLDYIEEGKEG
WREVVDVFFKPLKEKLELAEKEMAKITIEDKISDVPCDKCGRMMVIKQGRFGEFLACPGY
PDCKNTKPIVEKIEAPCPKCGGDILLKRSKKGNKFYGCSNYPECDFVSWQEPSTKKCKKC
GSYMVKKYSKSQGNYLECSNKECKNQETLEKDND
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgggacataatttagtaattgttgaatcaccagctaaagctaagactattggaaaatat
ttagggaaaaattttgttgtggaagcttccatgggccatgtgagagatttgcctaagagc
caattaggcgttgacatagaaaataattataatcctaaatatataacaatcaggggaaaa
ggagaacttctagataaactaagaagattagcaaaaaaaagtgataagatttatcttgca
actgaccctgatagagaaggtgaagctatttcttggcatttagcaaatgtattaaaaata
gataataaagaaaaatgtagaattgaatttaatgagataacaaaaaatgcgataaaaagc
tctataaaaaatccaaggactataaatgaaaacttagttgatgcccagcaggctaggcgt
gtcttagacagacttgttggatatgaaataagtccaattctttggaaaaatataaaatgg
ggattaagtgcaggaagagtacagtcagcagctcttaagctcatttgtgatagagaagaa
gagatagagaaatttattccaaaagagtattggactattgattgtgaactaaaaaaggat
aaacaaaagtttatagtaaaattgtctcacaaaaaaggaaccaagatagaaatatcaaat
gaagaggaaactaacaaaataataggtgaactaaaagctaacgaatttaaagtagataaa
gttaaaaaatatataaagactaagaatccgcttccaccatttactacaagcacactgcaa
caagatgcttacagaaaattaaactttcaaactaaaagaactatgtctatagcacagcag
ctttatgaaggaattgatgttaaaggacatggaacattaggccttataacttatatgaga
acggattcagtaagaatatctcaagaagctcaagaagcagcagctgaatttataaaagaa
agatttggtgaaaaatacgcgccagaaagctttagaaattataaaggaaagaagaatata
caagatgcccacgaagctatcagacctacctatatagaaattactccagaaatggttaag
gatagtctaaagggagaacagtacaaattatattctctaatatggaatagatttatggca
agtcagatgtcttcagcacagctaaatgcttatagcgtagatatattaaatggagaatat
aaattaaaagcaagcggatcatcaataaaatttaatggctttatgaaagtatatgagtat
gttgtagatgaggatgaggaaaatactaagcttccagaattagaagaaagcgaagttctt
gaatcatcaaatgttgcaggaaagcagcattttactcagccgccagcaaggttcacagaa
gctagttttgttaaaactatggaggaaaaaggaatagggagacctagtacctatgttcca
acaattactactatacttagtagaaaatatgtagatagagaaaagaagagtctaatacct
actgagcttggtaagatagtaaatagcgtaatggaacaatattttaatgaaatagtagac
ttagaatttactgcagatatggagatgaagctggattatattgaagagggaaaagaaggc
tggagagaagtcgtagatgtattttttaaacctctaaaggaaaaacttgaattagcagaa
aaagaaatggctaaaataactatagaggataagataagtgatgttccttgtgacaaatgc
ggaagaatgatggtaataaaacaaggaagattcggtgaatttttagcttgtcctggatat
cctgattgtaagaacactaaacctatagtggaaaaaatagaagctccttgtccaaaatgt
ggaggggatatattactaaagagaagtaaaaagggtaataaattctatggatgctccaat
tatccagaatgtgattttgtaagctggcaagaaccttcgacaaaaaaatgcaaaaaatgt
ggaagctatatggtgaaaaaatatagcaagagtcaaggaaactatttagaatgttctaac
aaagaatgcaaaaaccaagaaactcttgaaaaagataatgattaa
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