Clostridium cadaveris: KQH81_08200
Help
Entry
KQH81_08200 CDS
T07934
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ccaa
Clostridium cadaveris
Pathway
ccaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KQH81_08200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaa03019
]
KQH81_08200
03016 Transfer RNA biogenesis [BR:
ccaa03016
]
KQH81_08200
Enzymes [BR:
ccaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KQH81_08200
Messenger RNA biogenesis [BR:
ccaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KQH81_08200
Transfer RNA biogenesis [BR:
ccaa03016
]
Prokaryotic type
tRNA degradation factors
KQH81_08200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH-I_KHDC4-BBP
KH_2
EXOSC1
Motif
Other DBs
NCBI-ProteinID:
UFH66490
LinkDB
All DBs
Position
1744506..1746614
Genome browser
AA seq
702 aa
AA seq
DB search
MNHILETTFAGRNLKVEYGKIGMLSNAAILMSYGDTVILVNANASEKPREGVDFFPLSIE
YEERLYSVGKIPGGFIKREGRPSEKAILHARAIDRPLRPLFPKGYRNDVQVVCTVISVEN
DNLPEILAMNAASMALCLSSIPFTTPVGTVDVGLIDGKFIANPNSKEREASTLRLTVCAT
KERVMMIEAGADEIPEDVMIDAIKFGFDECQKIVAFQEEAMAKFGKEKIQPEIHTIDEAL
EKEIRDFAFEDIKAAMYITDKDERNAAIDKVKEKISEAFNEKYPDDSADIADIVYRSQKE
TVRNMILNEDRRPDGRGFHQIRPISCETSLLPRTHGTGLFTRGLTQVLTVATLGSLGDIQ
ILDGISEEESKRYMHHYNFPSYSVGEVRPLRGPGRREIGHGALAERALEPLIPSEEEFPY
TIRLVSEVLSSNGSTSQASVCGSTLALLDAGVPIKRPAAGIAMGLVTSEDLSKEKILTDI
QGIEDFFGDMDFKVAGTEKGITSIQVDTKIKGLSSQCIHQAIYDAREARLFILDKIKECI
PAARTEVSKYAPKTYSMSINPDKIRDVIGAGGKTINKIIAETGVKIDIKEDGKVFVTAVD
SEGGKAALKMIDDLTKEVQAGEIYLGKVTKIATFGAFVEILPNKEGLVHISKLDVNRVNK
VEDIVSVGDEILVKVTEIDNQGRINLSRKDAIKDSETEETTN
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatatacttgaaactacgtttgcaggtagaaatttgaaagttgaatatggaaaa
ataggaatgctgtctaatgctgctattcttatgagttatggtgatacagttattttagtt
aatgctaatgcatctgaaaaaccaagagaaggagtagatttctttcctctaagtatagag
tatgaagagagattatattccgttggcaaaattccaggaggatttataaagagagaagga
aggccttctgaaaaagctatcttacatgcaagagctatagatagacctttaagaccttta
tttccaaagggatatagaaatgatgtacaggtggtttgtactgtaatatcagtagaaaac
gataatcttccagaaatattagctatgaacgcggcttctatggcgttatgtctatcaagc
ataccttttacaactcctgttggtactgtagatgtaggtttaattgacggaaaattcatt
gctaatccaaattccaaggaaagagaagcaagtacgctacgtttaactgtatgtgcaact
aaagaaagagtaatgatgattgaagcaggtgcagatgaaatacctgaagatgttatgatt
gatgctattaaattcggatttgatgaatgccaaaagatagttgcattccaagaagaagct
atggctaagtttggaaaagaaaagattcaaccagaaatacatactatagatgaagcatta
gaaaaagaaatcagagattttgcatttgaagatataaaagctgctatgtatataacagat
aaagacgaaagaaatgcagctatagataaagttaaagaaaagatttctgaagcgtttaat
gaaaaatatccagatgattcagctgacatagctgatatagtttatagaagccaaaaagaa
actgtaagaaatatgattcttaatgaagataggcgtccagatggaagaggatttcatcaa
ataagacctataagctgtgaaacatcacttcttccaagaactcatggtacaggtttattc
actagaggacttactcaagttcttacagtagctacattaggatctttaggagatattcaa
atccttgatggaattagtgaagaagaatcaaagagatacatgcatcactacaatttccca
tcatatagtgttggagaagttagaccgcttagaggaccaggtagaagagaaataggtcat
ggtgctcttgctgaaagagctttagagcctcttattccatcagaagaagaattcccatat
actataagattagtttcagaagttttaagttctaatggatctacatctcaagcaagtgta
tgtggaagtacattagcattacttgatgcaggtgttcctataaagagaccagcagcagga
atagctatgggacttgtaacttcagaagatttatcaaaagagaagattttaactgatatt
caaggaatagaagacttctttggagatatggactttaaggtagcaggtactgagaaggga
ataacttctattcaagtagatactaaaattaaaggactttctagccaatgtatacatcaa
gctatttacgatgctagagaagctagactatttatactagataaaatcaaagaatgtata
ccagctgcaagaactgaagtttcaaaatatgcaccaaagacttatagtatgtcaataaac
ccagataagataagagatgttataggagctggtggaaagacaattaataagataatagct
gaaactggtgttaaaatagatataaaagaagatggaaaagtttttgtaactgctgttgat
tcagaaggcggaaaagcagctcttaagatgatagatgatttaactaaagaggttcaggca
ggagaaatctatctaggaaaagttactaaaattgcaacattcggagcttttgttgaaata
ctaccaaataaagaaggattagttcacatttctaaactagatgtaaacagagtaaataaa
gttgaagatattgtttctgtaggtgatgaaattcttgtaaaggttacagaaattgataat
caaggaagaataaatctttctagaaaagatgctattaaggattcagaaacagaagaaact
actaattaa
DBGET
integrated database retrieval system
