Clostridium cadaveris: KQH81_08585
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Entry
KQH81_08585 CDS
T07934
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ccaa
Clostridium cadaveris
Pathway
ccaa00300
Lysine biosynthesis
ccaa00470
D-Amino acid metabolism
ccaa01100
Metabolic pathways
ccaa01110
Biosynthesis of secondary metabolites
ccaa01120
Microbial metabolism in diverse environments
ccaa01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ccaa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KQH81_08585 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KQH81_08585 (dapF)
Enzymes [BR:
ccaa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KQH81_08585 (dapF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
DUF6120
PHTF1-2_N
Draxin
DUF3481
Motif
Other DBs
NCBI-ProteinID:
UFH63444
LinkDB
All DBs
Position
complement(1817636..1818466)
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AA seq
276 aa
AA seq
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MNFTKMHGIGNDFIIIDDIDNKYLGNEGDMAKKLCHRHFSIGADGVIFVRKSEIADIKML
IINSDGSYAAMCGNGLRCFAKYVYDRSIVKKQFINVETGDGIKKVKINDYHGKADTIEVN
MGRGSFMPYDIPAKSDEPIINKTISENNKIYSIISLRMGVPHTVILGNLENFDIHEGMKI
ENNELFLEGTNVDFCEIESKTSIKVKTWERGAGPTLACGTGCCASFLAAHKVGLIDNEVI
VHVDGGKLNIKLIDDDVYMIGESVEAFTGSICINEK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaattttactaagatgcatggaataggtaatgatttcattattatagatgacatagat
aataaatatttaggaaatgaaggagatatggctaaaaaattgtgtcatagacatttctca
ataggggctgatggtgttattttcgttagaaagagcgagattgctgacataaaaatgctg
ataataaattcggatggatcttatgcagctatgtgtggaaatggtttaagatgttttgct
aaatatgtttatgatagatctatagtaaaaaaacaatttataaatgtagaaactggagat
ggcattaaaaaggtaaagataaatgattaccatggcaaagcagatactatagaagttaat
atggggcgtgggtcatttatgccttatgacataccagctaaaagtgatgaacctataata
aataaaactatatcagaaaataataagatatactctataatatctctacgcatgggagtg
ccacatacggttatactaggaaaccttgagaattttgacatacatgaaggaatgaaaatt
gaaaacaatgagttgtttttggaaggaactaatgttgatttttgtgagattgaaagcaaa
acatcaataaaggtgaagacatgggaacgtggagctggaccaacattagcctgtggaaca
ggatgctgtgcctcttttttagcagcacataaagtaggattaatagataatgaagtaatc
gttcatgtagacggagggaaattaaatattaagcttatagatgatgatgtatacatgata
ggtgaatctgttgaagcttttacaggaagtatttgtataaatgaaaaatag
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