Clostridium cadaveris: KQH81_09370
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Entry
KQH81_09370 CDS
T07934
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
ccaa
Clostridium cadaveris
Pathway
ccaa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ccaa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KQH81_09370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccaa03000
]
KQH81_09370
Transcription factors [BR:
ccaa03000
]
Prokaryotic type
Helix-turn-helix
Other families
KQH81_09370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
TPR_2
TPR_1
TPR_8
TP_0763
TPR_7
MitMem_reg
Motif
Other DBs
NCBI-ProteinID:
UFH63585
LinkDB
All DBs
Position
complement(1984885..1986111)
Genome browser
AA seq
408 aa
AA seq
DB search
MDKIIGLLIKKKRLEMNMSQETLCQGICVISYLSKIERGTVDANHEIITELCKALGIQYY
GDIEKIFIEEFYDSLERALIWNNGLETLKELKNKYSYMKYSKEALAYIMGDFICKIEDIK
TVDINEFKEYEIYCDMNQLYYFYICLGYMHILKNKDYNSSYEYFKKARMIRPDKKGWYFL
GFSCYLDGNYHMAIDYFQKDLNLEFDQGDIDGVVNSCIYLANSYSNLGSIPLMMRYYNQA
LKLNKYLNKEIEYSIYYNIGASYINIDGEKAIDYLKKAEEIKADKDDFVLYQKLILGYIK
NENFCEAKKYYEKASKCSEENLEAEEDKVYRKDSLRMLQIIIEDENYLTNEEYGKILYRL
YNKGKDMVHYGVKLFFGKYYIKWLKANRRYKEALEVSESLTFPISNKK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggataagattataggattattgattaaaaagaaaagattagaaatgaatatgagtcaa
gaaacactatgtcagggtatttgtgttatatcatatttaagtaagattgaaagaggaact
gtagatgcaaaccatgaaatcatcactgaactatgtaaggctttaggaattcagtattat
ggtgatatagaaaaaatctttatagaagaattttatgattctcttgaaagagctcttata
tggaataatggcttagaaactcttaaagaactaaagaataaatattcttatatgaaatat
tcaaaagaagctttggcatatattatgggagatttcatatgtaaaatagaagatataaaa
actgtagatattaatgaatttaaagagtatgaaatttattgtgatatgaatcagctgtat
tacttttatatatgtctaggatatatgcatatattgaaaaataaagactataatagttca
tatgaatattttaaaaaggctcgtatgataagaccggataaaaaaggatggtattttttg
gggttctcatgttatttagacggaaattatcatatggctatagattattttcaaaaagac
ttaaacttagaatttgatcagggtgatatagatggggtagttaatagctgtatatactta
gctaacagttactccaatttagggtctattcctcttatgatgaggtattataatcaggca
ttaaagttaaataaatatttgaataaagaaatagaatatagcatttattacaacatagga
gcatcttatataaatattgatggggagaaagcaatagattatttaaagaaagcagaagaa
attaaagcagataaagatgactttgtactatatcaaaagcttatattaggatatataaaa
aatgaaaatttttgtgaagctaaaaaatactatgaaaaagcatctaaatgtagtgaggaa
aacttagaagctgaagaagataaagtttatagaaaagattcattaaggatgcttcaaata
ataattgaggacgaaaattatcttacaaatgaagagtatgggaaaatattatataggcta
tataataagggaaaagatatggttcattatggtgttaagcttttctttggaaagtattat
ataaagtggcttaaggctaatagaagatataaagaggcactagaagtttcagaatcactt
acttttcctataagtaataaaaaatga
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