KEGG   Clostridium cadaveris: KQH81_10555
Entry
KQH81_10555       CDS       T07934                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
ccaa  Clostridium cadaveris
Brite
KEGG Orthology (KO) [BR:ccaa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ccaa02048]
    KQH81_10555
Enzymes [BR:ccaa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     KQH81_10555
Prokaryotic defense system [BR:ccaa02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   KQH81_10555
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like ResIII EcoR124_C HSDR_N DEAD
Other DBs
NCBI-ProteinID: UFH66658
LinkDB
Position
complement(2238282..2242253)
AA seq 1323 aa
MIYTEEKDFEDAVIKTLIEYGWEPDVIRYPTEEDLIQNWADILFNNNKQNTRLNDCPLTA
GEMDQIINQVKALQSPLLLNEFINGRSISITRDNPEDQLHLGKEVSLKIYDRQEIALGQS
RYQIVQQPQFKTKSPILNNRRGDLMLLINGMPVIHLELKRSGIPVSEAYNQIEKYSHEGV
FRGIFSMVQIFVAMQPKESVYFANPGEDGVFNKAFYFHWADVNNNPINDWHTFVYRFLSI
PMAHMLIGFYTIADTDDGILKVMRSYQYYAAVGIADIVADKKSHWDDGNQLGGHIWHTTG
SGKTMTSFKAAQLIASNHDAEKVVFLVDRKELGIQSLKEYRSFASESESVQATENTTILT
SKLKSDDLDNTLIVTSIQKLSNITAEDSGLNDADLKAIQRKRMVIIIDECHRSTFGDMLI
HIKNTFKNAIIFGFTGTPIQDLNAKKDSTTPTIFGDEIHRYTLGDGIRDRNVLGFDPYLV
RIYDDNDLREQIALEKAKASSQQEAMSDPKKKKMFLKYMDSSQVKMYGEIVNGKWISGIE
DYIPNEQYQTPEYKMGIITDIKKKWPLYSRDRQFHAIFATSSIPEAVEYYRLMVKEMPEL
TITAMFDPSIDNEGGGSLEKEDGIVEMLDAYNSKFSQSFSIASYDKFRKDVSLRMSHKKP
YERLGKDEQIDILIVVNQMLTGFDSKWVNTLYLDKVMEYENLIQAFSRTNRLYDMAEKPF
GIIKYYRRPNTMEKNIEAAVKAYSGDVPTGLFVDKLPNNLRHMNTLYLGIEQLFKNANID
SFEKLPEDSATVAKFAKDFKLFVTHLEAALIQGFVWSRKFYPDENQVEDAIEVAVDEMTY
LTLLARYKELSRGGGGGRGGDVPYEVDIHITEYDTGKIDANYMNSNFDKYVTLIQGDTDP
SIVAAALKELHRSFSMLSQEEQRYAERFVHAVENGKADLVHGKTFRQYIADYMKADEYAR
INRVVRRLGCSFNLLRELLERKVNSSTLDNYGKFTELKNSVNKIKSREFFKRVLRNEYVE
LRLPLYSEEYLRFFLLSGGHDPYLYVSDEEMYTQPNDNGSVSEAPNVGVVLTENDYVGKK
TVSTVKSKTLTNWYSESKAVASAVKTDCFAYVDNKVCLASSQYIQRTDDGHLELTEYAKA
HEEECFLQFIVGENDGKLHYVKLPAAKADVTFNYYDEISEELLTQYGLVNEMSKEMLKAI
GESEFGDALTKLMDKHICNYSGRLLKSVTGLDIRTISNMKKGENLTKLNVISACLGIHIP
YRVSDRMLQLADLSLNMTSPGKIGADNETYDMLLHLKWATDYGNVYDELKEQSLDYLIHQ
PPL
NT seq 3972 nt   +upstreamnt  +downstreamnt
attatatatacagaagaaaaagactttgaagatgctgtcattaaaaccctgattgaatat
ggctgggaacctgatgttatacgatatcctactgaagaagatttgattcaaaactgggca
gatattcttttcaataataacaagcaaaatacacgtttgaatgattgtcctttgacagca
ggtgaaatggatcagattataaaccaggtaaaggcgctacagtcaccacttctactgaat
gaatttatcaacggtagaagtatttcaatcactcgcgataacccagaagatcaactacat
cttggaaaagaagttagtttgaaaatttatgaccgtcaagaaattgctttaggccaaagt
cgctatcaaatagtacagcagccacaattcaaaaccaagtctcccattcttaacaataga
cgtggagatctgatgctacttattaatggtatgccggtaatccacctagagttaaagcgt
agtggtatcccagtaagtgaagcgtataaccagatagagaaatattcccacgaaggtgta
ttccgtggaattttttctatggttcagatttttgtggcaatgcagccaaaggaatcagtt
tattttgccaatccgggtgaagatggcgtgtttaataaggcgttttacttccattgggct
gacgttaataataatcccatcaatgattggcatactttcgtatataggtttttgtctata
cctatggcacatatgttaataggtttctatacgattgcagatactgatgatggaattctt
aaggtaatgcgaagctatcagtattatgctgctgtaggcattgctgacattgtggcagat
aagaaaagtcactgggatgacggtaaccagttgggaggccatatttggcatacaacgggc
agtggtaagactatgaccagctttaaggcggcgcagttgattgccagcaaccatgatgca
gagaaggtagtattcttggttgaccgtaaagaactaggtattcaatccttaaaagaatac
cgttcttttgcatctgaaagtgaatcagtacaggcaactgaaaatacgacgatcctgact
tctaaattgaaaagtgatgatcttgataatacgctaattgttacctctattcagaaactc
agtaatattactgctgaggattctggattaaatgatgcagacctcaaagcaatacagcgt
aagcgcatggttatcattattgatgaatgtcatcgttctacattcggagatatgctgatt
cacatcaagaatacttttaagaatgctattatttttggtttcaccggaacaccaatacag
gatttaaatgcaaagaaagacagtaccacacctactatttttggagatgaaattcataga
tatactttaggagatggaataagagacaggaatgtacttgggtttgatccataccttgtt
cgtatatatgatgacaacgatttgagggaacaaattgcattagaaaaagcaaaagcatct
tctcagcaggaagccatgagtgacccaaaaaagaagaaaatgtttctcaaatatatggat
tcatcacaggtgaaaatgtacggagagattgttaatggtaaatggatcagtggtatagag
gattacattccaaacgagcagtatcaaacacctgaatataagatgggaattattactgat
attaaaaagaaatggcccctttacagccgagacagacaatttcatgctatttttgcaacc
agcagtattccggaagcagtagagtactatcgtctgatggtaaaggaaatgccggaacta
acgattacggctatgttcgatccgtctattgataacgagggtggtggctctcttgaaaag
gaagacggcattgtagaaatgttggatgcctataacagtaagttttctcaatctttctcc
attgcttcttacgataaatttcgtaaagatgttagtttgcgcatgtcacataaaaagcct
tatgaacgcttgggcaaagatgagcaaattgacattttgattgttgtaaatcaaatgcta
actggatttgattctaagtgggttaatacgttatacctagataaagttatggaatacgaa
aatcttatccaggcattttctagaaccaaccgtctctatgatatggcagagaaacctttc
ggaatcataaaatactatcgacgtcctaataccatggagaaaaacattgaagccgcggta
aaagcctactcgggagatgttcccacaggtctttttgtagacaagctcccaaataacctc
agacatatgaatactttgtatttgggtattgagcagctcttcaaaaatgctaatattgac
agttttgaaaaactaccagaggattcagctacagtagcgaaatttgccaaggatttcaaa
ctgtttgtaacacatctggaagctgcattgattcagggatttgtatggtctagaaaattt
tatccagacgagaatcaggttgaggatgctattgaagtagcagttgacgagatgacatat
ttgaccctccttgctagatacaaagaactttcaagaggcggtggtggaggccgaggcgga
gatgttccttacgaggtggatattcatatcactgaatatgatactggaaaaattgatgct
aactatatgaattccaattttgataagtatgtcacattgatacagggcgataccgatcct
tcaattgtggctgcggcattaaaagaactacatagatctttttccatgttatctcaagaa
gaacaacgctacgctgaacgatttgtgcatgctgtagagaatggaaaagcagatttagtt
catggaaaaactttcaggcagtatattgcagattacatgaaggcagacgaatatgccaga
attaatcgtgttgttaggagacttggttgtagctttaatcttcttcgtgaactgttggag
agaaaagttaatagtagcactcttgataattatggtaaatttacagaacttaaaaattcg
gtaaataagattaaatctagagagttttttaagcgtgttctccgaaacgagtatgttgaa
cttagattaccattatatagtgaagagtatctccgtttcttcttgttaagtggaggacat
gatccatatctatatgtgagtgacgaagaaatgtatactcagccaaatgataacggttca
gtatcagaagcaccaaatgttggagttgttcttacagaaaatgattatgttggaaaaaag
acagtttcaacggtaaaaagtaaaacgctgaccaactggtactctgaaagtaaagcagta
gcaagcgcagtaaaaactgattgttttgcatatgtggacaataaggtttgtctggcatct
tctcaatatattcaacgaactgacgatggccaccttgaattaacagaatatgcaaaagct
catgaggaagaatgtttccttcaattcattgtgggtgaaaatgatgggaaattgcactat
gttaaacttcccgcagcaaaagcagatgtgacattcaattattacgatgagataagtgaa
gaattacttactcaatatggactggtaaatgaaatgtctaaagaaatgctgaaagctatt
ggggaatcagagtttggagatgcattgacaaagcttatggataaacatatttgcaattac
tcgggtagattgttgaaaagtgtaaccggcttggatatcagaaccatcagtaatatgaaa
aaaggcgaaaaccttactaagctaaatgttatttctgcttgtctcggaattcatattcca
tatagggtaagtgaccgaatgctgcaattagcagatctaagtttaaatatgacttcgcct
ggtaaaataggtgcggataatgaaacttatgatatgttgttacatcttaaatgggctact
gattacgggaacgtgtatgatgaacttaaagaacaaagtttagactatcttattcatcag
ccaccattataa

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