Clostridium cadaveris: KQH81_11395
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Entry
KQH81_11395 CDS
T07934
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ccaa
Clostridium cadaveris
Pathway
ccaa03030
DNA replication
ccaa03410
Base excision repair
ccaa03420
Nucleotide excision repair
ccaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KQH81_11395 (polA)
03410 Base excision repair
KQH81_11395 (polA)
03420 Nucleotide excision repair
KQH81_11395 (polA)
03440 Homologous recombination
KQH81_11395 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccaa03032
]
KQH81_11395 (polA)
03400 DNA repair and recombination proteins [BR:
ccaa03400
]
KQH81_11395 (polA)
Enzymes [BR:
ccaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KQH81_11395 (polA)
DNA replication proteins [BR:
ccaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KQH81_11395 (polA)
DNA repair and recombination proteins [BR:
ccaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KQH81_11395 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KQH81_11395 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_2
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
UFH66668
LinkDB
All DBs
Position
complement(2392154..2394763)
Genome browser
AA seq
869 aa
AA seq
DB search
MNMEKLLILDSNSLMNRAFYALPPLTNKDGIHTNAIYGFTNMLLKLEDELKPDYVVAAFD
RKAPTFRHKEYGDYKAGRKKMPPELAEQFPIMKELLNRLAINIFEIDGFEADDLIGTLAK
YTENEGMEVFIVTGDRDALQLASKNIKVIITKKGITEKEIYDEQRMIDDYGVTPTQFIDV
KGLMGDSSDNIPGVPGVGEKTAYKLIKQYGSIEEVLNHIDDIKGKKVKENLMEYREQAMF
SKKLATIITEVPIEIDLEDIKSKKNYDAAGVRDMFFDLQFKTLLDRVKDENEAPEEEVAF
EMIDSLDKLQSFISELKEDKKAYMTFTINDASRQSTIYISTLNVMVKNKVYIVDLEKLKT
YDNSIVILKEVLEDESIKKITFDVKNAYTAFKKIGIELNGVSDDIKISAYLIDAAKSEYD
IKTLVNEYLHKDFNGEGLELTAKEVWSLKPLYEKLNSMINDYKMEDLLYNIELPLTKVLS
SMETLGFKVNGDILETLGIKFNGELVRLESEIYELSEEKFNINSPKQLGKILFEKLDLPV
IKKTKTGYSTNAEVLEALYDKHPIIEKILSYRQLSKLYSTYIEGLKNVIDDDSKIHSSFN
QTVTTTGRLSSTEPNLQNIPIKYEMGREIRKVFIPDNENCVILSADYSQIELRVLAHIAG
DENLIDAFKHHSDIHTKTASEVFKTAIEDVTPLMRSRAKAVNFGIVYGIGDFSLAKDLKI
SRKEAKEYIDTYFERYPKVKDFIENIISEGKENGYVETIVNRRRYIPEINSSNKIVKSLG
ERLAMNTPIQGSAADIIKLAMVKVYNELQKRNLKSTLILQVHDELILNVYKDELEEVKEL
VKTQMENVMDLEVPLEVSMSIGDNWYEAK
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
attaatatggaaaaattacttatactagatagcaacagtttgatgaatagagctttctat
gcccttccacctttgacgaataaagatggtattcatactaatgcaatttatggttttaca
aacatgcttctaaaattagaagatgaacttaaaccagactacgtggtagctgcttttgac
agaaaagctcctacttttagacataaagaatacggtgattataaagctggaagaaagaaa
atgcctccagagcttgctgagcaatttcctattatgaaggaacttcttaatcgccttgcc
ataaatatatttgaaatagatggttttgaggctgatgaccttattggaactttggcaaaa
tacacagaaaatgaaggaatggaagtttttatagttactggagatagagatgcacttcaa
ttagcatctaagaacataaaagtaattataactaaaaaaggaatcacagaaaaagaaatt
tatgatgagcagagaatgatagatgattatggagtgactcctactcaatttatagatgta
aagggacttatgggagacagttctgacaatattccaggagttcctggtgtaggagaaaaa
actgcatataagcttataaagcagtatggaagtattgaagaagttttaaaccatatagac
gatataaaagggaaaaaagtaaaagaaaaccttatggaatacagagaacaagctatgttt
tctaaaaagcttgcaactataataacagaagtacctatagaaatagatttagaagatata
aagtcgaagaagaattacgatgctgctggtgtacgtgatatgttctttgatcttcagttt
aaaactcttttagacagggttaaagacgagaatgaggcacctgaagaagaagtggctttt
gaaatgattgattctttagataaacttcaaagttttatatctgagcttaaagaagataaa
aaagcttatatgacttttacaataaatgatgcctcaagacaatcaaccatatatataagt
actttaaatgttatggttaaaaacaaagtttatatagtagatttagaaaaacttaaaact
tacgataattcaattgttattttaaaggaagttcttgaggatgaaagtataaagaagata
acttttgatgttaagaatgcttatactgcatttaaaaagattggcatagagctaaatgga
gtgtctgatgatataaagatttcagcttatcttatagatgctgctaaaagtgagtatgat
ataaaaactttagtaaatgaatatttacataaggattttaatggagagggtttagagctt
acagcaaaagaggtatggagtttgaaacccttgtatgaaaaattaaattctatgataaat
gattacaaaatggaggatcttctatataatatagagcttccattaactaaagtgttatca
tccatggaaactttgggatttaaagtaaatggtgatatcttagaaactttaggcataaag
tttaatggagagcttgtaagattagaatctgagatatatgagctttcagaggagaaattt
aatataaattctccaaaacagcttggaaaaatattatttgaaaaacttgatttgcctgtg
ataaagaaaactaagacaggatattccactaatgctgaagttttagaagcactttatgat
aagcatcctataatagaaaagattttatcttataggcagctgtcaaaattatattcaact
tatatagaaggattaaaaaatgtcattgatgatgattcaaagatacattcatcttttaac
caaacagtgactactactggaagattatcaagtacagagcctaatcttcaaaatattcct
ataaagtatgaaatgggaagagaaataagaaaagtatttatacctgataatgaaaactgt
gttatattatcagcagactattctcaaatagagcttagagttttggcacatatagcagga
gatgaaaatttgatagatgcgtttaaacatcatagtgacatacacactaaaactgcatca
gaagtttttaaaacagctatagaagatgtaactccacttatgagaagcagagctaaggca
gtaaactttggaatagtttatggaataggtgattttagtcttgcaaaagacttaaaaata
tctagaaaagaagctaaagagtatatagacacttattttgagagatatccaaaagttaaa
gattttatagaaaatataatatctgaaggaaaagaaaatggatatgttgaaactattgta
aatagaagaagatatattccggagattaattcttcaaacaagatagtaaaatctttaggt
gaaagattagccatgaatactcctatacaaggaagtgctgctgacataataaagcttgct
atggttaaagtttataatgaacttcaaaagagaaatcttaagagcacacttatacttcaa
gttcacgacgaacttatactgaatgtttataaggatgagcttgaagaagttaaagaatta
gtaaagactcaaatggaaaatgttatggacttagaagtacctttagaagttagtatgagc
ataggagataattggtacgaagcaaagtag
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