Clostridium cadaveris: KQH81_15215
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Entry
KQH81_15215 CDS
T07934
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
ccaa
Clostridium cadaveris
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
PAS
Sigma54_activ_2
PAS_9
PAS_4
PAS_8
HTH_50
PTS-HPr
PAS_10
PAS_GdpP
AAA_5
AAA
HTH_8
Mg_chelatase
Diguanyl_cycl_sensor
CCDC85
AAA_7
Zeta_toxin
Parvo_NS1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UFH64604
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Position
3166780..3168795
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AA seq
671 aa
AA seq
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MVKRNVTVSIENGLHTRIAAMVVNKAAEVKERYGVDLLIKRKNDDSFIGISILALISLRI
QQGEVITIGSKNSNYASIKAVEVLCDYITKDLAYNYGIMNEVDAIIQESTIANEQILSDL
PMGIIVIDTNCTISNINSYALKILNKPSKDILGHQITDVIPNSDLPNIINTGTKEFGKIQ
HINNNILLVNRSPIISDNHIIGAVGVLQDISEVMGMKEVNTRFKKLLEASHDMICFVDEN
RKITYINPAYEHHFNINPNDILGKDLLDVSPNGLRIKSFTSKEKIENFIQKKEGIEIISN
IEPLFIDGDFKGVISLSKPLSEIRHWIGKVKKYEAEIDYYREELLKQSREQNSFKNIIGF
NSNLRDIITMCKKASQSPSTVLIGGESGTGKELIAKAIHSNSPRYNNTFVKVNCAAIPET
LMESELFGYEKGAFTGALKSKPGKFAIANEGTIFLDEIGDLPLSMQVKLLRVLQEKEFES
LGSTKPQKIDVRIIAATNRNLAEMVRDGTFREDLYYRLNVLSLVLPPLRERKDDIRLLVH
HFIQKFNTELNKNILGIDNNALMLLERYDWPGNIRELQNIIERAMNLCESSMISVSDLPF
HLKDEKYSGDALINTPNGDIMPFECYEKEIIKAAMAKYGSYNKAGKALGLTHRTISLKCK
KYDIDIKKINN
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
ttggttaaaagaaatgtaactgtaagcatagaaaatggtcttcatactagaattgctgcg
atggtggttaataaagctgctgaagttaaggagcgttatggagttgaccttcttataaaa
aggaaaaatgatgattcttttataggaataagcattcttgctttaatatctcttagaatt
cagcaaggtgaagtgataaccataggatctaaaaattctaattatgcttcaataaaagct
gttgaggtactttgtgactatataacaaaagatcttgcctataattacggcataatgaat
gaagttgatgccataattcaagagagtaccatagcaaatgaacagattttatcggacctt
cctatgggaattatagttatagatacaaactgtacaataagcaatataaattcttatgct
ctaaaaatattaaataagccttctaaagatattttaggtcatcaaatcacagatgtaatc
cctaactctgaccttccaaatataataaatacaggaactaaagagtttggtaagattcaa
catataaataataatatactcctggtaaatcgttctccaattatatcagataatcacata
ataggtgccgttggagttcttcaggatatctctgaagtaatgggtatgaaggaagtaaat
acaagattcaaaaaactccttgaagcatcccatgatatgatttgctttgttgatgaaaac
agaaagataacttatataaatccagcttatgagcaccattttaatataaatccaaatgat
attttaggaaaagatcttttagatgtgtcaccaaatggccttagaataaagtcattcaca
tcaaaagagaagatagagaattttatccaaaagaaagaaggcatagagataatctcaaac
atagaacctctttttatagatggcgatttcaaaggagttatatcactttctaaaccttta
agtgaaatacgtcattggataggaaaagtaaaaaaatatgaggctgagatagattactat
agagaagagctcttaaaacaaagcagagagcaaaattcatttaagaatataatcggattt
aattcaaatttgagagatataattacaatgtgcaaaaaggcttctcaaagtccatcaaca
gttcttataggaggtgaaagcggtacaggtaaagagcttattgcaaaagctattcatagc
aatagtcctcgttataataacaccttcgtaaaagtgaattgtgctgcaatacctgaaact
cttatggagagtgaattattcggctatgagaaaggagcatttacaggtgctttaaagagt
aaacctggaaagtttgctatagctaatgaaggaactatatttttagatgaaattggcgac
cttcctctttcaatgcaggtaaaacttttacgagtgcttcaagaaaaagaatttgagagt
cttggttctacaaaaccacaaaagattgatgtaagaataatagctgctaccaatagaaat
ttggctgaaatggttagagatggtacatttagagaagatctttactatagacttaatgtt
ctctccctagtcctaccgcctttaagagaaagaaaagatgatataagactgcttgttcat
cattttatccaaaaattcaatactgaactaaacaagaatatacttggaattgataataat
gcattgatgttgcttgaaagatacgattggccaggtaatataagagaacttcaaaatata
atagaacgtgccatgaatctatgcgagtcttctatgataagcgtatcagaccttccattt
catcttaaagatgaaaaatattctggtgatgctcttataaacactccaaatggagatatt
atgccttttgagtgctatgaaaaggaaataataaaagctgctatggctaaatacggcagt
tacaataaggctggtaaagctcttggtcttacacacagaacaatttcattgaaatgtaaa
aagtacgatattgatattaagaaaataaataattaa
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