Clostridium cadaveris: KQH81_15410
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Entry
KQH81_15410 CDS
T07934
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ccaa
Clostridium cadaveris
Pathway
ccaa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccaa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KQH81_15410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaa03021
]
KQH81_15410
03400 DNA repair and recombination proteins [BR:
ccaa03400
]
KQH81_15410
Enzymes [BR:
ccaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KQH81_15410
Transcription machinery [BR:
ccaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KQH81_15410
DNA repair and recombination proteins [BR:
ccaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KQH81_15410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF211
SAM_EPH
DUF4332
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
UFH64639
LinkDB
All DBs
Position
complement(3207075..3208022)
Genome browser
AA seq
315 aa
AA seq
DB search
MLEIEKPKIECVEVSEDGSYGKFVVEPLERGYGITLGNALRRILLSSLPGVAATSVKIDG
VLHELSTVQGVKEDVTEIILNIKALALTMTGEGPKTIYIDAQGPGEVTGADIKTDGDIEV
INKDLHIATLDTDGKLYMEITINNGRGYVSQTRNKTDDLPISSIAVDSIYTPVKRVNFTV
ENTRVGQISDYDKLILEIWTNGTIKTEEAISLSAKILIEHFKLFMTLTDHANDVEIMIEK
EEDKKEKALEMTIEELDLSVRSYNCLKRAGINTVQELAQRSMDDMMKVRNLGKKSLEEVE
RKLKELGLGLRLNDE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaatagaaaagccaaaaatagaatgtgtagaagttagcgaagacggaagctat
ggtaaatttgttgtagaacctcttgagaggggttatggtataacattaggaaatgcttta
agaagaatattgctttcctcattgccaggtgttgcagcaacttctgtaaaaatagatggg
gttttacatgaactttcaactgttcaaggtgttaaggaagatgttacagagataatctta
aacattaaagctttagctcttacaatgacaggagaaggtccaaagactatttatattgat
gctcaaggaccaggagaggttactggtgctgatataaagacagatggagatattgaggtt
attaataaggacctacatatagctactctagatacagatggtaagctatatatggagatt
actattaataatggtagaggctatgtaagccaaactagaaataagacagatgatcttcca
atatcatcaatagctgtagattctatatacactccagtaaagagggtaaactttactgta
gaaaacacaagagtaggtcaaattagtgattatgacaaattgatattagaaatttggact
aatggaactattaagactgaagaagctatcagtttatcagctaaaatacttatagagcat
ttcaaactattcatgactcttacagatcatgctaacgatgttgagataatgatcgaaaaa
gaggaagataagaaagaaaaagccttagaaatgaccatagaagaacttgatttatcagta
agatcttacaactgtttaaagagagctggtataaatacagttcaggagcttgctcaaaga
tctatggatgacatgatgaaggtaagaaatttaggtaagaaatcccttgaagaagtggaa
agaaaacttaaagaattaggcttaggcttaagactaaacgatgagtaa
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