Clostridium cadaveris: KQH81_15975
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Entry
KQH81_15975 CDS
T07934
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ccaa
Clostridium cadaveris
Brite
KEGG Orthology (KO) [BR:
ccaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccaa03032
]
KQH81_15975
03036 Chromosome and associated proteins [BR:
ccaa03036
]
KQH81_15975
03400 DNA repair and recombination proteins [BR:
ccaa03400
]
KQH81_15975
DNA replication proteins [BR:
ccaa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KQH81_15975
Chromosome and associated proteins [BR:
ccaa03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KQH81_15975
DNA repair and recombination proteins [BR:
ccaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KQH81_15975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Lmo2446-like_N
TFIIB
Phage_portal_2
HU-DNA_bdg
Arteri_nsp7a
Motif
Other DBs
NCBI-ProteinID:
UFH66732
LinkDB
All DBs
Position
complement(3301217..3301537)
Genome browser
AA seq
106 aa
AA seq
DB search
MYNSYIYSNFKEEKQVNKADLISRMADKSELNKKQTEAALKAFVESVEEALESGDKVQLV
GFGTFETRERAERTGRNPKTGEEIKIAASTMPVFKAGKEFKDRVNK
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atatataattcctatatatactctaattttaaggaggaaaaacaagtgaacaaggcagat
ttaatttcaagaatggcagacaaaagcgagttaaacaagaaacaaacagaggcagctctt
aaagccttcgtagaaagtgttgaagaagctttagaaagcggagataaagtacaattagtt
ggatttggaacttttgaaacaagagaaagagcagaaagaactggaagaaatccaaagact
ggagaagaaataaagattgctgcatctacaatgccagtattcaaagcaggaaaagagttc
aaggatagagtaaacaaataa
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