Clostridium cadaveris: KQH81_16620
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Entry
KQH81_16620 CDS
T07934
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K21467
penicillin-binding protein 3
Organism
ccaa
Clostridium cadaveris
Brite
KEGG Orthology (KO) [BR:
ccaa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ccaa01011
]
KQH81_16620
Peptidoglycan biosynthesis and degradation proteins [BR:
ccaa01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KQH81_16620
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
MecA_N
DUF3887
Tipalpha
DUF4179
DUF2950
SnoaL_3
Motif
Other DBs
NCBI-ProteinID:
UFH64852
LinkDB
All DBs
Position
complement(3445782..3447812)
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AA seq
676 aa
AA seq
DB search
MIKNKGVYIGIAAVLGVVLIGGGIFFMTKKSANKPEDALNAYVELLNSKDYEAMYNAISN
DSKENISKEDFIARNKNIYEGIEAQNIEIEVSETSKDGDEASITYTTDMNTAAGDISFQN
NIKTVKDKESKEYKLLWNSQAIFPELGDSDKVRITTKRATRGSILDRNKNALAKDGIAAD
VGIVPGKLANKDEAIKTIAEILEISPDIINNKLGASYVKDDMFVPIKVISANDARVKNLL
TIPGIMVNDKQSRIYPLGAIAAHLTGYVQSINAEELEARKGQNYNQNSVLGKAGLEKLYE
EKLRGIDGAEIYITDKLGKKKSTIASREVKNGNDVIVTIDNSLQTLLYNQLEKDKGTSVA
MNPNTGEVLALVSAPGYDPNDFVMGMSQEKWDSLNSDTNKPLYNRFQSNAVPGSAFKPIT
AAIGLDTKTLDANATKPISGLKWQKDSSWGDYFVTRVSDYGSETNLLNAMVHSDNIYFAQ
AALDIGKDKFAEELKKLGFDENLPFEYGVSTSKFASDGAIKTDVQLADSGYGQGEILINP
LHLASIYTMFLNGGNVLNPYLEYKDSIQAKIWKENAVSKDAADTVLNSLIQVVENPSGTG
HEAYIDGLKIAGKTGTAEIKASQSDTTGTELGWFVAMTTNKGNNNLLVAVMAEDVKDRGG
SHYVIPMVKKALQTVK
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaataaaggggtatacataggtatagcagctgttttaggtgtagttttaata
ggtggaggaattttcttcatgactaaaaaatccgctaataagcctgaagatgctttaaat
gcgtatgtagaactattaaattcaaaagattatgaagccatgtataacgcgatcagcaat
gatagcaaagagaatatatcaaaagaagattttatagcaagaaataaaaatatatacgag
ggtatagaagcacaaaacatagagatagaagttagcgaaacatccaaggatggagacgaa
gcaagcataacctatactacagatatgaacactgcagcaggagacataagctttcaaaac
aatattaagacagtaaaagataaggaatcaaaagaatataagttactatggaattctcag
gctatatttccagagcttggagacagtgataaggttagaataactactaagagagctaca
agaggaagcatattagatagaaacaaaaatgccttggctaaagatgggattgcagcggac
gtaggaatagtaccaggtaaacttgcaaataaagatgaagctataaaaacaatagccgag
atattagaaatttcgcctgatatcataaataataaacttggagcatcttatgtaaaagac
gatatgtttgtacctataaaagtaatatcagcaaatgatgctagagtaaaaaatctttta
accataccaggaataatggttaacgacaaacagagcagaatatatccattaggagcaata
gcagcgcatcttactggatacgtccaaagtataaatgctgaagaattagaagctcgtaaa
gggcaaaattataatcaaaattcggttttaggcaaagcaggccttgaaaaattatatgaa
gaaaagcttagagggatagatggtgcggaaatatacatcactgacaagctaggaaagaaa
aaatctacaatagcatcaagagaggttaaaaatggtaatgatgttatagttactatagat
aactctctacaaactcttttgtataatcaattagaaaaagacaaaggtacatctgtagca
atgaatcctaatacaggagaagttttagctcttgtaagtgctccgggatatgatcctaat
gattttgttatgggtatgtctcaagaaaaatgggattcattaaattcagatacgaacaaa
cctttatacaatagatttcaaagtaatgctgtaccaggttccgcatttaaacctataact
gcagcaataggattagatactaaaacattagatgcaaatgctaccaagcctatatcaggt
cttaaatggcaaaaggacagcagctggggagactattttgtaacaagagtttctgactat
ggaagtgagactaacttattaaatgccatggtacattcggataatatatattttgctcaa
gctgccttagacataggaaaagataaatttgcagaggaattaaaaaagctaggatttgat
gagaatttaccttttgaatatggagtgtcaacttcaaaatttgcgtcagatggagctata
aagacagatgttcagcttgcagatagtggatatggacagggagagattcttataaatcct
cttcacttagcatctatttatactatgtttttaaatggtggtaatgtattgaatccatat
cttgagtataaggattcaatacaggcaaagatttggaaagagaatgcggtttcaaaggat
gctgctgatacagttttaaattcacttatacaggttgttgaaaatccaagtggtacaggc
catgaagcatatatagatggattaaaaatagcaggaaaaacaggaacggcagaaataaaa
gcaagccaaagcgatacaacaggaacagagcttggatggttcgtagcaatgactacaaat
aagggaaataataatctcttagtagcagtaatggcagaggacgttaaagatagaggtgga
agtcattatgttataccaatggtcaaaaaagctttacagacagtaaaataa
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