Chryseobacterium camelliae: PFY12_00560
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Entry
PFY12_00560 CDS
T08762
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ccab
Chryseobacterium camelliae
Pathway
ccab03030
DNA replication
ccab03430
Mismatch repair
ccab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFY12_00560 (holA)
03430 Mismatch repair
PFY12_00560 (holA)
03440 Homologous recombination
PFY12_00560 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccab03032
]
PFY12_00560 (holA)
03400 DNA repair and recombination proteins [BR:
ccab03400
]
PFY12_00560 (holA)
Enzymes [BR:
ccab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PFY12_00560 (holA)
DNA replication proteins [BR:
ccab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PFY12_00560 (holA)
DNA repair and recombination proteins [BR:
ccab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PFY12_00560 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Calici_coat
Motif
Other DBs
NCBI-ProteinID:
WBV60626
LinkDB
All DBs
Position
119931..120968
Genome browser
AA seq
345 aa
AA seq
DB search
MKELDLILKNIKNKEVLPIYFFHGEEPYFIDLAVKALEHDFLNEDEKAFNQTMVYGKDTS
YQEILSLARQFPMMGDKQVLIVKEAQDLKLNEPETKALEAYVENPVPSTVLVFAHKHKKL
DSRKKVTKSLDKINALFLSESIKENQLPKWIADECTSLGIKTAPNISHLLAEYLGNDLSR
IANELNKLKIILKEDEVLDGKIIEDHIGISKEYNVFELQKALGTKNANAAFKIAHFMGKN
PKNNPFVMMLASLYNYFSNVIIYNTMAGQSPQAIASQMGVNPYFIKDYAESARLYPLKHA
TRVISILREFDMKGKGLGAVNMSEAELIKELVYKIINVDKIKMKV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattagatttaatcctcaaaaatattaaaaataaagaagttttacctatttat
tttttccacggagaagaaccctactttatagatcttgcagtaaaagcccttgaacacgac
tttttgaatgaagatgaaaaagcattcaaccaaacgatggtgtacggaaaagatacgtct
tatcaggaaattctttctttggcacgccagtttccgatgatgggagacaaacaggttctt
attgtaaaagaagctcaggatttaaaattaaatgagcctgaaacaaaagcgttggaggcg
tatgtagaaaatccggttccgtctacagtactggtttttgctcacaaacacaagaagtta
gatagccggaaaaaggttacaaaatctttagataaaatcaatgccttatttttaagtgag
tcgataaaagaaaatcagcttccgaaatggattgccgacgaatgtacttctttaggcatc
aaaacagctcccaatatttctcatcttttggcagaatatttgggaaatgatctttccaga
atcgctaatgaactgaataaacttaaaattatccttaaggaagatgaagttctggacggg
aaaatcattgaagaccacattggaatcagtaaagagtataatgtttttgaactgcaaaaa
gcattaggaaccaaaaatgccaatgctgcgttcaaaattgctcattttatgggtaaaaat
ccaaagaataatccttttgtgatgatgttggcgagtctgtataattatttctccaatgtc
attatttataatacaatggcgggacagtcaccacaggcaattgcctcccagatgggagtg
aatccgtatttcattaaagactatgctgaatcggcaaggctgtatcctttgaagcatgca
acccgagtgatctctattttaagagaatttgacatgaagggaaaaggcttaggagctgta
aatatgagtgaagcggaacttattaaagagcttgtttacaaaattatcaatgttgataaa
attaagatgaaagtgtaa
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