Chryseobacterium camelliae: PFY12_02840
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Entry
PFY12_02840 CDS
T08762
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ccab
Chryseobacterium camelliae
Pathway
ccab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PFY12_02840 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccab03019
]
PFY12_02840 (recQ)
03400 DNA repair and recombination proteins [BR:
ccab03400
]
PFY12_02840 (recQ)
Enzymes [BR:
ccab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PFY12_02840 (recQ)
Messenger RNA biogenesis [BR:
ccab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PFY12_02840 (recQ)
DNA repair and recombination proteins [BR:
ccab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PFY12_02840 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
HHH
Motif
Other DBs
NCBI-ProteinID:
WBV61066
LinkDB
All DBs
Position
complement(614198..616402)
Genome browser
AA seq
734 aa
AA seq
DB search
MSAKKANLSGELKKYFGFSTFKGQQEHIIENLLGGKDIFVLMPTGGGKSLCYQLPALISE
GTAIVVSPLIALMKNQVDAVNGLSSDDGVAHVLNSSLNKTQTKQVFDDIKSGKTKLLYVA
PESLIKDDYLDFLKEVKISFFAIDEAHCISEWGHDFRPEYRNLKSIIDKIADVPVIALTA
TATPKVQDDIQKTLGMSNALVFKESFNRPNLYYEVQPKVNVDKEIVKFINQHKGKSGIVY
CLSRRKVEEFAQLLQVNGINALPYHAGLDQKIRVANQDKFLMEEVDVIVATIAFGMGIDK
PDVRFVIHYDIPKSLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKPVSEREI
GLQLLNEVVGYAETSMSRRQYILYYFGENFDPINGDGAKMCDNSSNPPKLKDATDDLKKV
LELIQETGEKFKAKDLISIIAGKETAVTKSYKLEQTSYFGFGKEETDNHWKTILRQATVQ
NFLQKDIETYGVLKIAEKGKLVLKGKLEHSFLIAEDREFDLTQAKAESDQIQQQSGGGLD
QNLFTLLKDLRKKVAKKHGIPPYTVFMDPSLEDMTVQYPITVEEIMKIYGVGEGKAKKYG
KEFADFISKYVEDNNIERTQDMVLKQVANKSSHKVFIIQSTDKKIDLEDIARAKNLSMDE
LLKEMERIVYQGTKLNIDYYIEDNFDEDIVDGFMEFMNESESDSMKVLLDEFGDELSDEE
VRMLRIKFISDVAN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaaaaaaagccaatttatcaggcgaattgaaaaaatatttcgggttttctact
tttaaaggtcagcaagaacatattatagaaaacctgttaggaggaaaggatatatttgtt
ttgatgcctacaggagggggaaaatccttatgttatcagttacctgctcttatttcggaa
ggtactgccatagtagtttcgcctttaatagcgttaatgaaaaaccaggtagatgcagta
aacggactgtcatctgacgatggagtagcacatgttttaaattcatctttaaataaaacc
cagaccaaacaggtctttgatgatattaaaagcggtaagaccaaacttttgtatgtggct
ccggaatctttaattaaagatgattatttagactttttgaaagaagtgaaaatttctttc
tttgcgattgacgaggcacattgtatttcagaatggggacacgatttcagaccggaatac
aggaatttgaaatcaattatcgataaaattgcagatgtacctgtgattgctctaactgct
acagcaacacctaaagttcaggatgatatccagaaaactttagggatgagcaatgctttg
gtttttaaagaaagtttcaacagaccgaatctttattacgaagtacagccaaaagtaaat
gtagataaggaaatcgtaaaattcatcaatcaacataaaggaaagtccggaattgtttat
tgtttaagccgtagaaaagttgaagaatttgctcagcttttacaggtgaacgggatcaat
gctctgccttatcatgccggtctcgatcaaaagatcagagtggccaatcaggataaattc
ctgatggaagaagtagatgtaattgttgctaccattgcattcggaatgggtattgataaa
ccggatgttcgttttgtgatccactacgatattccgaagtctttggaaagttattatcag
gaaaccggacgtgccggaagagatggaggagaagggcattgtttagcgttttatgatcct
aaagacattgaaaaactagagaaatttctggctcaaaagcctgtttctgaaagagaaatc
gggttacagcttttaaatgaggtggtagggtatgccgaaacttcaatgagcagaagacaa
tatatactgtattattttggtgaaaatttcgatccgattaatggtgacggagccaaaatg
tgcgataattcatccaatccgccaaagctgaaggacgctaccgatgatttgaagaaagta
ttggaacttatccaagagaccggagaaaaattcaaagcaaaagatttgatttctatcatt
gcaggaaaagaaactgcggtaacgaagtcttataagctggagcagacttcttatttcggt
tttggaaaagaggaaacggataatcactggaaaactattctaagacaggcaactgttcag
aatttcctgcagaaagatattgaaacctatggcgttttaaagattgcggaaaaaggtaaa
ttagtgttgaagggtaaattagaacattccttcttaattgcggaagacagagaatttgat
ttaactcaggctaaagcagaaagtgatcagatccagcagcaatccggaggcggattagac
caaaacttattcactttattaaaggatctaaggaaaaaagttgccaaaaaacacggaatc
ccgccttatacggtgtttatggatccgagtttggaagatatgacggttcagtatccgatt
accgttgaagagatcatgaaaatttatggagttggtgaaggaaaagctaaaaaatatggt
aaagaattcgcagattttatcagtaaatatgtagaagacaataatatcgaacgtactcag
gacatggtactgaaacaggtggctaacaaatccagccataaggttttcattatccagagt
acagataaaaaaattgatcttgaagacatcgcaagagccaaaaacctttcaatggatgaa
ttgttgaaggaaatggaacgtattgtttatcaaggaactaaattaaatattgactattat
atcgaagacaattttgatgaagatatcgtagatggtttcatggaattcatgaatgaatct
gaaagcgatagtatgaaagtcttgttggacgaatttggggatgaactttctgatgaagaa
gtgagaatgctcagaataaaattcatcagcgacgttgccaattaa
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