Chryseobacterium camelliae: PFY12_07995
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Entry
PFY12_07995 CDS
T08762
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccab
Chryseobacterium camelliae
Brite
KEGG Orthology (KO) [BR:
ccab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccab03032
]
PFY12_07995 (topA)
03400 DNA repair and recombination proteins [BR:
ccab03400
]
PFY12_07995 (topA)
Enzymes [BR:
ccab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PFY12_07995 (topA)
DNA replication proteins [BR:
ccab03032
]
Prokaryotic type
DNA Topoisomerases
PFY12_07995 (topA)
DNA repair and recombination proteins [BR:
ccab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PFY12_07995 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
WBV59006
LinkDB
All DBs
Position
complement(1755327..1757885)
Genome browser
AA seq
852 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGKDFEVKSSFGHIRDLPKKGMGIDLGTFTPDYEVSADKK
KLVTELKAAVKKAEMVWLASDEDREGEAIAWHLAEELKLKPENRKRIVFHEITKNAILKS
IENPRDIDQNLVNAQQARRVLDRIVGFEMSPVLWKKVKPGLSAGRVQSVAVRLIVEREKE
IREFTPKASFKLDGIFLNKTEQEIAAKLKKDFEKEEEAEKFLELAKTAEFKVLNVETKPG
TRSASAPFTTSTLQQEASSRLGYNVTNTMRLAQRLYEEGYITYMRTDSVNLSQEAIEGAK
KQITSEYGAEYSSPRNYTTKSASAQEAHEAIRPTDFAVTSIGDAQLNRLYQLIYRRTLAS
QMANAKIEKTIIEIGNAKLSQHFEAQGEVIIFDGFLKAYGIVKTEDDDEENNDKLLPKVT
VGEVLSYKKITATEKFTRPSARYTEAGLVRKLEELGIGRPSTYAPTIQTIQNREYVDKRE
IDPQTREVVKMSLVKDKIKKEVLDEKFGGDKNKFVPTDTGEVVSDFLTDNFKEILDYGFT
ARVEESFDEIANGDQKWKEMMTGFYSKFHPRIEEVEEHAERATGDRLLGVDPKTGKNVHA
RIGRFGAMIQIGETDDEEKPVFASLMAGQNIATITFEEALELFKLPFDLNEVDGQSVSVG
VGRFGPYVKWGETYISIPKGEDPLSVDQKRAEEIINEKKIADAPIATYKGEPVTKGTGRF
GPFIKYQSIFVNVPKRYDFENLSQSDINELIDAKLEKEANRYIQQWEKEKISIENGRWGP
FIKFGKAMFKIPKKADDTKYEADELKELSLDEVKKWITDQDPKAFAEKKKPAAKKATTKK
EATAKKAVAKKK
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatttagtaatcgtcgagtcaccggcaaaagcaaaaactattcagaaatat
ttaggtaaggatttcgaagtgaaatcaagtttcggtcatatccgggatttacctaaaaaa
ggaatggggattgatcttggaacctttactcccgattacgaagtttccgcagataaaaag
aaattggtaacagaattgaaagccgctgtgaaaaaagccgaaatggtttggctggcttcc
gatgaagaccgcgaaggagaggctattgcatggcacttggcggaagaactgaaactgaaa
ccggaaaacagaaaaagaattgttttccatgaaattactaaaaatgccattctaaaatca
atcgaaaatcctagggatatagatcaaaacttagtcaatgctcagcaggcaagaagagtc
ttggatagaattgttggttttgaaatgtccccggttctctggaaaaaggtaaaaccggga
ttgtcggcaggaagagtacagtcggttgcggtgagattgattgtggaaagagaaaaagaa
atccgtgagttcactccaaaagcaagtttcaagcttgacggtattttcttaaataaaacg
gagcaggaaattgctgcaaaacttaaaaaagacttcgaaaaagaagaagaggcggaaaaa
ttcttagaattagcaaaaactgccgaattcaaagttttaaatgttgaaacaaaaccgggg
acacgttctgcatctgcaccgtttacaacttcgactttacagcaggaagcttcttcaaga
ttaggatataatgtgaccaatacgatgcgtcttgcgcaaagactgtatgaagaaggatac
attacctatatgagaacggactcggtaaacctgtctcaggaagccatcgaaggagcaaaa
aaacaaattacttcagaatacggagcagaatattcttcaccaagaaattatacaacgaaa
tctgcatcggcacaggaagctcacgaagcgatccgtccgacggattttgcggtaacaagc
attggtgatgctcaattaaacagattatatcaattaatttatagaagaactttagcatct
cagatggccaatgctaaaattgagaaaacaattattgaaattggtaatgcaaaactttct
cagcattttgaagcacaaggggaagtgatcatttttgatggtttcctaaaagcttacgga
atcgtaaaaacagaagacgatgatgaagagaacaacgataaattacttccgaaagtgact
gttggagaggttttaagctataaaaaaatcacggcaacagaaaaattcacaagaccaagt
gccagatatacggaagcaggtttggtgagaaaactggaagaattgggaatcggtcgtccg
tcaacgtacgcaccaactattcagaccattcagaaccgtgaatatgttgataaaagggag
atcgatccgcagacgagagaagtggtgaaaatgtctttggtaaaagataaaattaaaaaa
gaagtccttgacgagaaattcggaggagataaaaataaatttgttcctacggatacaggt
gaagtggtaagcgatttcttaacagataatttcaaagaaatcctggattacggtttcacg
gcaagagtcgaagaaagtttcgacgaaattgcaaacggggatcagaaatggaaagaaatg
atgacgggtttctactcaaaattccacccgagaattgaagaggtagaagaacatgcagaa
agagcaacgggagacagacttttaggagttgatcctaaaaccggtaaaaacgttcatgca
agaatcggaagattcggagcgatgatccaaattggggaaacggatgatgaagaaaaaccg
gttttcgcatcattaatggcgggtcagaatattgcaacgatcacttttgaagaagcattg
gaattgttcaagcttccgtttgatttaaatgaagtggacggacaatcggtttcagttggt
gtcggaagattcggaccttatgtaaaatggggcgaaacgtacatcagcattccaaaaggg
gaagatccgctttcggtagatcagaaacgtgccgaagaaattatcaacgaaaagaaaatt
gcagacgcaccgattgcaacgtataaaggagagcctgtaacaaaaggaacgggaagattc
ggaccttttatcaaatatcaaagcattttcgtgaatgttccgaagagatacgattttgaa
aacctttctcaaagcgatattaacgaattgattgatgccaagctggaaaaagaagcgaac
agatatatccagcaatgggaaaaagaaaaaatctccattgaaaacggaagatgggggcct
tttatcaaattcggaaaagctatgtttaaaattccgaagaaagcagatgatacgaaatat
gaagcagatgaattgaaagaactttccttagatgaggttaaaaaatggattaccgatcag
gatccgaaagcctttgctgagaaaaagaaaccggctgcgaagaaagcaacgactaaaaag
gaagcaacggcaaagaaagcagttgctaaaaagaaataa
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