Chryseobacterium camelliae: PFY12_10970
Help
Entry
PFY12_10970 CDS
T08762
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ccab
Chryseobacterium camelliae
Pathway
ccab00521
Streptomycin biosynthesis
ccab00523
Polyketide sugar unit biosynthesis
ccab00525
Acarbose and validamycin biosynthesis
ccab00541
Biosynthesis of various nucleotide sugars
ccab01100
Metabolic pathways
ccab01110
Biosynthesis of secondary metabolites
ccab01250
Biosynthesis of nucleotide sugars
Module
ccab_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ccab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PFY12_10970 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PFY12_10970 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
PFY12_10970 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PFY12_10970 (rfbB)
00525 Acarbose and validamycin biosynthesis
PFY12_10970 (rfbB)
Enzymes [BR:
ccab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
PFY12_10970 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
3Beta_HSD
adh_short
NAD_binding_10
Sacchrp_dh_NADP
NmrA
KR
tRNA-synt_1f
DUF2532
Motif
Other DBs
NCBI-ProteinID:
WBV59578
LinkDB
All DBs
Position
complement(2392231..2393310)
Genome browser
AA seq
359 aa
AA seq
DB search
MKNIIITGGAGFIGSHVVREFVKNNPETTIINLDALTYAGNLENLKDIENEPNYVFEKAD
ITKPEELRAIFEKYNPDAVVHLAAESHVDRSITDPMAFINTNVNGTANLLNLCKEFWTLN
PEHTHGRFPDEKRKNLFYHVSTDEVYGSLGETGFFLETTSYDPQSPYSASKAASDHLVRA
YGNTYGMPFIVSNCSNNYGPNHFPEKLIPLCISNIINEKPLPIYGDGKYTRDWLFVIDHA
KAIHQIFNEAKTGETYNIGGFNEWQNIDLVKELIRQMDEKLGKPSGYSEKLITYVKDRPG
HDKRYAIDATKLNKDLGWKPSVTFEEGLGKTIDWFLENQEWLENVTNGDYQNYYEKQYH
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatataattatcaccggtggcgccgggtttatcggttctcatgttgtaagagaa
tttgtaaagaacaatcctgagacaacgatcatcaatcttgatgctttgacgtatgccgga
aaccttgagaatctgaaagatatcgaaaacgaacctaattatgttttcgaaaaagccgac
attacaaaaccagaagaattaagagccatcttcgaaaaatataatcctgatgccgtggtt
cacttagctgctgaaagtcacgtagacagaagcatcacagatccgatggcatttatcaat
accaatgtcaacggaacggccaatcttttgaatctttgtaaagaattctggaccttaaac
ccggaacatacccacggaagatttcctgatgaaaaaagaaagaatttattctatcatgtt
tcaacagatgaagtatatggaagtttgggagaaacaggttttttcctggaaaccacatct
tacgatccacagtctccttattccgcatctaaagccgcttcagatcatttggtaagagcc
tatggaaatacgtatggaatgccgtttatcgtttccaactgttccaataattacggaccg
aatcatttccctgaaaaattgattcctctttgtatttcaaatatcatcaatgaaaaaccg
cttccgatttacggagacggaaaatacacaagagattggctatttgtgattgatcatgct
aaagccattcatcagatttttaatgaggcgaaaaccggagaaacttacaatatcggaggt
ttcaacgaatggcagaatattgatctggtaaaagaactgatcagacagatggatgaaaaa
ttaggaaaaccttccggttattctgaaaaactgatcacttatgtaaaagacagacctgga
catgataaacgctatgctattgatgccaccaaactgaacaaggatttgggttggaaaccc
tctgtaacgtttgaagaaggactaggaaaaacaatcgactggttcctggaaaaccaggaa
tggctggagaatgtaacaaacggagactaccaaaactactacgaaaaacaatatcattaa
DBGET
integrated database retrieval system