Chryseobacterium camelliae: PFY12_11375
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Entry
PFY12_11375 CDS
T08762
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ccab
Chryseobacterium camelliae
Pathway
ccab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PFY12_11375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccab03021
]
PFY12_11375
03400 DNA repair and recombination proteins [BR:
ccab03400
]
PFY12_11375
Enzymes [BR:
ccab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PFY12_11375
Transcription machinery [BR:
ccab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PFY12_11375
DNA repair and recombination proteins [BR:
ccab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PFY12_11375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
WBV59656
LinkDB
All DBs
Position
2468047..2469042
Genome browser
AA seq
331 aa
AA seq
DB search
MAILQFIKPDKVILLNSDEFKGQFEFRPLEPGFGLTIGNALRRVLLSSLEGYAISSIKIE
GVEHEFSTIPGVIEDVTEIILNLKQVRLKAAAENQANEQVVAKVSGQTMITAGDLGKAIS
GFEVLNPDLVICNLNSDVTFEITFNIEKGRGYVPSEQNKSNNAPMGTIAIDSIFTPIKKV
QYSIENYRVEQKTDYEKLVLDIETDGSISPQNALTEASKILIYHFMLFSDERITLETEAV
KASIQYDEETLHTRQLLKSKLADMDLSVRALNCLKAAEVETLGELVSYSKSDLMKFRNFG
KKSLTELEELVHSKGLNFGFDVAKYKLDADN
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttacaattcataaaacccgataaagtaattttacttaactctgatgaattt
aaaggtcaattcgaattcagacctttagaaccaggtttcgggcttacaatcggtaatgct
ttgagaagagtgttgctttcttctctggaaggatatgctatttcatctatcaaaatagaa
ggtgtagagcacgaattttcaactattccgggagtaatcgaagatgttaccgaaattatt
cttaaccttaagcaggtaagattaaaagctgcggcagaaaaccaggctaatgagcaggta
gttgctaaagtttcggggcaaacgatgatcactgctggagatttaggaaaagcaattagc
ggatttgaggtgctaaacccagatctggtaatttgtaacctgaattctgatgttactttc
gaaattactttcaatattgaaaaaggtagaggatatgttccttcagaacaaaataagtca
aacaatgcacctatgggtactattgctattgactctattttcacgccgatcaagaaagta
caatacagcattgaaaattatcgtgtagagcaaaaaacagactacgaaaaacttgtatta
gatatagaaactgacggatctatcagtcctcagaacgctttaacagaagcttctaagata
ttaatttatcatttcatgttgttctctgatgagagaatcactttggagactgaagcagta
aaagcatctatccaatatgacgaggagactcttcacacaagacaattacttaagtctaaa
ttagcagatatggatctttctgtaagagccctaaactgtctgaaagcagctgaagtagaa
actcttggagaattggtttcttacagtaagtctgatttgatgaaattcagaaattttggt
aaaaaatctttgacagaactagaagaattagtgcattcaaaaggtcttaacttcggtttc
gacgttgcaaaatataaattagacgctgataattaa
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