Chryseobacterium camelliae: PFY12_13685
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Entry
PFY12_13685 CDS
T08762
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ccab
Chryseobacterium camelliae
Pathway
ccab03030
DNA replication
ccab03410
Base excision repair
ccab03420
Nucleotide excision repair
ccab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFY12_13685 (polA)
03410 Base excision repair
PFY12_13685 (polA)
03420 Nucleotide excision repair
PFY12_13685 (polA)
03440 Homologous recombination
PFY12_13685 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccab03032
]
PFY12_13685 (polA)
03400 DNA repair and recombination proteins [BR:
ccab03400
]
PFY12_13685 (polA)
Enzymes [BR:
ccab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PFY12_13685 (polA)
DNA replication proteins [BR:
ccab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PFY12_13685 (polA)
DNA repair and recombination proteins [BR:
ccab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PFY12_13685 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PFY12_13685 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
DUF2202
HHH_2
ACS_CODH_B_C
DUF7397
Motif
Other DBs
NCBI-ProteinID:
WBV60083
LinkDB
All DBs
Position
2961047..2963887
Genome browser
AA seq
946 aa
AA seq
DB search
MDATQDKRLFLIDAYAMIFRGYYALIRNPRLTSKGLDTSAIFGFTNSLIELIRREKPTHL
AVVFDVGRASVRTDDFADYKANRSETPEAIKIAVPYIHKILEAMHIPILGVEGYEADDVI
GTIACKAEKEGYTTFMVTPDKDFAQLVTDKIKIYKPGLKGGDVEILGVEEVKAKYEIEDP
KQVIDYLAMMGDAVDNIPGLEGVGEKTAMKFLKEFGSIENLLANTDQLKGKLKEKVEASA
ERGILSKKLATIICDAPIEFHQEQYDLETPDFEKVKEVFDEIEFRRLYENLYRAFAPATI
TTTIVAEVEVTVTETTPQQKVAQAVGQLDLFATYEELEQATSTKSTIEQNDHLYQFVNNP
KAQKMLVDNLLKQQVVCFDTETTSLNELEAELVGMSFSYKKGLAYYIPLSENRDEVLQTL
EIFRPFFEKEDLVKVAHNLKFDYKILKQYDITVKGAMFDTMIAHYLLNPDGRHGMDYLSE
VYLNYKPVSIETIIGKKGKNQGNFRDADVRTQTDYAAEDADVTFQLYELFAPQLKKENLE
ELFFSIEMPLMEVLAKMELAGISLDEKWLAQESIDLENDLKQLESKIFELSGEEFNMNSP
RQLGDILFEKMQLDPKAKKTKTGQYATSEDVLQKLASKHEIIQHILEYRTYQKLKSTYVD
ALPSQIEKTDNRVHTNFSQTTAATGRLASVNPNLQNIPIRTLRGQQIRGAFVSGEGKKII
SADYSQIELRLIAEISGEDNMIKAFQNGEDIHASTAAKLFKIPLEEVSKTQRSQAKTVNF
GIIYGQGAFALAEQTGLSRTEAKQMIEAYFETYPKLKQYMAEQVNKARETGYVETILGRK
RHLKDINSNNFVVRGHAERNAVNAPVQGSAADVVKMAMIKIQKELEKEKLQTKMLLQVHD
ELVFEAPIDEIEVATNIIKMEMENAIETQVPLLVEVGVGNNWLEAH
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaactcaagataaaaggttatttctcatcgatgcctatgcaatgatttttaga
ggatattatgcattgatcagaaatccgaggcttacaagtaaaggattagacacttctgct
attttcggttttaccaactctttaatagagctgatcagaagagaaaagccgactcatttg
gcagtggtttttgatgtaggaagagcaagcgtaagaactgatgattttgcagattataaa
gccaacagaagcgaaactccggaagccattaaaattgcagttccatacattcataaaatt
ctggaagccatgcatattccaattttgggagtggaaggatatgaagccgatgacgtgata
ggaaccattgcctgtaaagcagaaaaagaaggttacaccacctttatggtgacacctgat
aaagattttgcacaattggttaccgataaaattaaaatatataaacccggattaaaaggg
ggagatgttgaaattttaggagtggaagaagtcaaagcaaaatatgaaatcgaagatccg
aagcaggtgatcgactatcttgctatgatgggggatgcagtcgataatattccgggattg
gaaggagtaggtgaaaaaacagcgatgaaattcctgaaggaattcggaagcattgaaaat
cttttagccaataccgaccaattaaaagggaaattaaaagaaaaagtagaagcttcggca
gaacgaggaattctatcaaaaaaattggcaaccattatctgtgatgcgcctattgaattc
caccaggaacaatacgatctggaaacacccgattttgaaaaagtaaaagaagttttcgac
gaaatcgaattcagaagactatacgaaaatctttaccgtgcttttgctcctgcaacgatt
acaacgactattgttgctgaggtcgaagtgaccgtaacggaaactacaccgcaacaaaaa
gtggcacaggcagtaggtcaactagacttatttgcaacgtatgaagaattagaacaggcg
acttccacaaaatctaccatcgagcagaacgatcatttgtatcaattcgtaaataatccg
aaagcgcagaagatgttagtagataatttattgaagcaacaggtagtttgtttcgataca
gaaacaacttccttgaatgaattggaagccgaactggtagggatgagtttttcttataaa
aaaggattggcatattatattcctttgtccgaaaacagagatgaggttttacaaacgcta
gaaattttcagacctttcttcgaaaaggaagacttggtaaaagttgcccataatttaaaa
ttcgattataaaattcttaaacagtacgatattaccgtaaaaggagccatgttcgatacg
atgatcgcgcattaccttctcaatccggacggaagacacggaatggattatctttcagaa
gtgtacctgaattataaaccggtgtcaatagaaacgattatcggtaaaaagggaaaaaat
cagggtaatttcagagatgcagacgtaagaactcagaccgattatgctgcagaagatgct
gatgtaacttttcaattgtatgagttgtttgcccctcaattaaaaaaggaaaacctggaa
gaattattcttcagcatagaaatgccattgatggaagtcttggcaaaaatggaattggca
ggaatttctctggatgaaaaatggctggctcaggaaagtatcgatttagagaatgattta
aagcaattagaatcaaaaatatttgaactttcaggagaggaatttaatatgaattctcca
agacagttaggagatatcttatttgaaaaaatgcagcttgatccgaaagctaaaaagaca
aaaacaggtcagtatgctacttccgaagatgttcttcaaaaattggcttcaaaacatgaa
attatccagcatattctggagtacaggacctaccagaaattaaaatcgacttatgtggat
gcattgccgtcacagattgaaaaaacagataaccgcgttcataccaacttttcacagact
acggcagcaacaggccgtttggcgagtgtaaacccgaatttgcagaatattccgatcaga
actttgagaggtcagcaaattcgtggagcttttgtttccggagaagggaaaaagattatt
tctgccgattattcacaaattgaattacgtttaattgctgaaatttcaggagaggataat
atgatcaaagcgttccagaatggtgaagatatccacgcttctacagcggcgaaattgttt
aagattccgttggaagaagtttcaaaaacgcagagaagtcaggcaaaaacagtcaacttc
gggattatttacggacaaggagcttttgcattggcggaacaaaccggtttatccagaacg
gaagccaaacaaatgatcgaagcatattttgagacgtatccaaagctgaaacaatatatg
gctgaacaggtcaacaaagcccgtgaaaccggctatgtggaaactattttaggaagaaaa
cgtcatttaaaggatattaattccaacaactttgtcgttcgtggtcatgccgaaagaaat
gcggtcaatgctccggttcagggaagcgcggcagatgtggtgaaaatggcaatgataaaa
attcagaaagagctggaaaaagaaaaacttcagaccaaaatgttacttcaggtgcatgac
gaattggtgtttgaagcaccaattgatgaaattgaagtcgctacgaatattatcaaaatg
gaaatggaaaacgccatagaaacacaggttccgttattggtagaagttggtgttggaaat
aactggctggaagcacattaa
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