Cutaneotrichosporon cavernicola: CcaHIS019_0101350
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Entry
CcaHIS019_0101350 CDS
T09540
Symbol
TIF1, CcaverHIS019_0101350
Name
(RefSeq) uncharacterized protein
KO
K03257
translation initiation factor 4A
Organism
ccac
Cutaneotrichosporon cavernicola
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccac03019
]
CcaHIS019_0101350 (TIF1)
03012 Translation factors [BR:
ccac03012
]
CcaHIS019_0101350 (TIF1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccac04147
]
CcaHIS019_0101350 (TIF1)
Messenger RNA biogenesis [BR:
ccac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CcaHIS019_0101350 (TIF1)
mRNA cycle factors
Stress granule specific factors
CcaHIS019_0101350 (TIF1)
Translation factors [BR:
ccac03012
]
Eukaryotic type
Initiation factors
eIF-4
CcaHIS019_0101350 (TIF1)
Exosome [BR:
ccac04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CcaHIS019_0101350 (TIF1)
Exosomal proteins of bladder cancer cells
CcaHIS019_0101350 (TIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
Flavi_DEAD
UvrD-helicase
tRNA-synt_1b
CMS1
Motif
Other DBs
NCBI-GeneID:
85491288
NCBI-ProteinID:
XP_060452683
UniProt:
A0AA48I0Z2
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Position
1:complement(join(333034..333972,334082..334262,334315..334383,334663..334670))
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AA seq
398 aa
AA seq
DB search
MADNNENGLELSADLIESNWDQVVDNFDNMDLKPELLRGVYAYGFERPSAIQQRAIMPII
TGRDVIAQAQSGTGKTATFSISILQRIDTTVKRTQALILAPTRELAQQIQKVVIALGDYL
NIDCHACVGGTAIREDIAKLNDGPHVVVGTPGRVFDMINRGALKTDAVKMFCLDEADEML
STGFKDAIYDIFQLLPAETQVVLLSATMPTDVLEVTKKFMRDPIRILVKRDELTLEGIRQ
FYIAVEKEEWKLDTLCDLYETVTITQAVIFCSTRRKVDWLTQKLHEREFTVSAMHGDMDQ
AQREVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPASKENYIHRIGRGGRFGR
KGVAINFVTTDDAKMLREIEAFYNTQVDEMPLNVADLI
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaacaacgagaacggcctcgagctttcggccgaccttatcgagtccaactgg
gaccaggtcgtcgacaacttcgacaacatggacctcaagcccgagctcctccgtggtgtc
tacgcctacggtttcgagcgcccgtctgctattcagcagcgcgctatcatgcccatcatt
actggccgtgacgttatcgcccaggcccagtcgggtaccggcaagactgccaccttctcc
atctccattcttcagcgcattgacaccaccgtcaagcgcacccaggccctcatccttgct
cccacccgtgagcttgcgcagcagatccagaaggtcgtcattgcccttggtgactacctc
aacatcgactgccacgcctgtgttggtggcactgccatccgtgaggacattgccaagctc
aacgacggccctcacgtcgttgtcggcactcccggccgtgtcttcgacatgatcaaccgt
ggtgccctcaagacggacgctgttaagatgttctgccttgacgaggccgacgagatgctc
tcgactggcttcaaggacgccatctacgacatcttccagctcctccccgccgagacccag
gttgtcctcctctcggctaccatgcccaccgacgtcctcgaggtcaccaagaagttcatg
cgtgaccccatccgtatcctcgtcaagcgtgacgagcttaccctcgagggtattcgtcag
ttctacatcgccgttgagaaggaggagtggaagctcgacactctctgcgacctctacgag
accgtcaccatcacccaggccgtcatcttctgctccactcgccgcaaggtcgactggctc
acgcagaagctccacgagcgcgagttcactgtctccgccatgcacggtgacatggaccag
gctcagcgtgaggtcatcatgaaggagttccgctcgggctcgtcgcgtgtcctcatcgcc
actgacctcctcgcccgtggtatcgacgtccagcaggtctcgctcgtcatcaactacgac
ctccccgcctcgaaggagaactacatccaccgcatcggtcgtggtggtcgtttcggccgt
aagggtgttgctatcaacttcgtcaccaccgacgatgctaagatgcttcgtgagatcgag
gcgttctacaacacccaggtcgacgagatgcccctcaacgtcgccgaccttatttaa
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