KEGG   Cutaneotrichosporon cavernicola: CcaHIS019_0101380
Entry
CcaHIS019_0101380 CDS       T09540                                 
Symbol
msh2, CcaverHIS019_0101380
Name
(RefSeq) uncharacterized protein
  KO
K08735  DNA mismatch repair protein MSH2
Organism
ccac  Cutaneotrichosporon cavernicola
Pathway
ccac03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CcaHIS019_0101380 (msh2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccac03400]
    CcaHIS019_0101380 (msh2)
DNA repair and recombination proteins [BR:ccac03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     CcaHIS019_0101380 (msh2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_IV MutS_I Clathrin
Other DBs
NCBI-GeneID: 85491291
NCBI-ProteinID: XP_060452686
UniProt: A0AA48I5I1
LinkDB
Position
1:join(341096..341098,341134..341185,341229..341975,342009..343792,343827..344071,345469..345531,345780..345825,345870..346306,346352..346949)
AA seq 1324 aa
MPMYEKELATAKPQFDDMDKDAEDRFCRFVEKLGPRSDGLVRLFDRGEFFSAHGPDALLI
ADQVYKTTNVLKYLGSRKAASSNTRGLPSVTISMTLAKAFLRDCLTSKQMRVEIYEPEEG
ARAKNNARWQLAKVASPGNISQLEDLLFASEDLLSNAVSMALRIQIRDGQRTVGAAFVDV
QEKTIGVAEYAEDENFGNTESFLIQLGIKECVVQADDKRADHELSKLRMLIERCGVIVTE
RKASEFQAGSVQQDLGRLLDETHPTSLPEYDLKVAMSALAALISYLGLMSDSPMHGQFRL
HHHDLSQYMKLDASAVKALNLMPTPELGGNKNMSLYGLLNRCKTSQGQRLLGRWLKQPLV
NLHSIQERQNIVEMFVNDDITRRVLQDEHLRVMPDFHRICKKFHRGVATLEDIVRVYQAV
EKLPRVIESLEKVQTENPVYGTLLNTAYINELNDHLEKLEKFSEMVENTIDLDDLANHNY
TLQPSLDSELERIRGDLVDVRDQLDAEHRRVGADLGVDIDKKLHLENHHVYKYSFRITKA
EASLLRGKKQFIELSTQKSGTIFTTATLREASDDFARLQEEYEAKQRHLVKEVVGIASSY
TPVLELLDNIIAAIDVTVSLAHVSSHAPVPYVKPVMKERGGGDVVVRGARHPCLEVQDDI
QFISNDHEMRKGSSEFQILTGPNMGGKSTYIREIGVIALMAQLGCFVPADSAELPIFDCI
LARVGAGDSQLKGVSTFMAEMLETATILRSATRDSLIIIDELGRGTSTYDGFGLAWAISE
HIASQIRCFCLFATHFHELTTLADHIRWVKNLQVRAEVQPAAAGSKQDRQITLLYQVIDG
HSDQSFGIHVAELARFPEPVVRLAKRKAEELEDFGEGDASPAAKLPKEEVDAGTEIVHSF
LDEWRRRAEGGDGEVQLAALRAAVDEYKDKFEGNAWITNVLGSLHLSSSGRIFTHENAPT
FPSLFTMFAQLLTGALFATVTNAQVTATGTMGVTNPSAAVMGTPINQTSEARLLSLNSIN
DFCIFGPLLPNSVVGDTEEEQVAWCVQPRNNARVIPDGTIHSAHLVKTPRYWQIQGYGDF
TRMNIAAGDNGGELDPHGAKGTGNPIGGNVTSNATGTDVSYEEWMNFMSFNTFCLRICIA
EEGAYTAEQQCQHEIDLMGCEWVMPGDYTNNSFTECQADSAYPPGWFPQPDGSVSTFHQR
YTGTNSPDGALWTIGVTVTPPAPFSTPASSQCTTFSSIGNGIPPESLNRDAAFTWSGSLP
ATGGGSPAAATGSNSGGQASASAGVDAASAGQGSDQAKSAAGPGYVIAGASLAAMLIGVA
AVAL
NT seq 3975 nt   +upstreamnt  +downstreamnt
atgcccatgtacgaaaaggagctggctacggccaagccccagttcgacgacatggacaag
gacgccgaggaccgtttctgccgctttgtggaaaaactgggtccgcgctctgatggtctg
gtgcggctgttcgaccgcggcgagttcttttccgcccacggtccggacgcgctcctcatc
gccgatcaggtgtacaagacgaccaacgtgctgaagtatctcggttcgcgcaaggctgcg
tcgagcaacactcgcggccttccgtctgtgactatcagcatgacgctcgctaaggccttc
ctccgcgactgcctgacgagtaagcagatgcgggtcgagatctatgagccggaggaaggg
gcgcgagccaagaacaacgcgcgctggcaactcgccaaggttgcgtctccgggcaacatt
agccaactcgaggatttgctgtttgcaagtgaggacttgctgtcaaacgccgtcagcatg
gcgctccgtatccagatacgcgacgggcagcggaccgtcggtgcagcgttcgtcgacgtg
caggagaagacgattggtgtcgccgaatacgcggaagacgagaactttgggaacacggag
agttttctcatccagctcggcatcaaggaatgcgtcgtccaagccgacgacaagcgtgcc
gaccacgagctctccaagctccgtatgctcattgagcgctgcggcgtcatcgtgactgag
cgcaaggcgtctgagtttcaggcaggcagcgtccaacaggacctgggcaggttgttggac
gagacacacccaaccagcctccccgagtatgacctcaaggttgccatgtctgcactcgcc
gctctcatatcctacctcggcctcatgtctgactcgcctatgcacggccagtttaggtta
caccatcacgacctctcgcagtacatgaaattggacgctagcgcggtcaaggcgctcaac
ctcatgcccacgcccgaactcggaggtaacaagaacatgagcctgtacgggctgcttaac
cgctgcaagacgagccagggccagcggctcctcggacgatggctcaagcagcccctggtc
aatctgcactcgattcaggagaggcaaaacatcgttgagatgttcgtcaatgacgacatc
acccggcgggtgctacaagacgagcacctccgtgtaatgcccgactttcatcgcatctgc
aagaagtttcaccgtggcgtcgcaacccttgaggacattgtgcgcgtgtaccaggctgtc
gagaagcttccccgcgtcattgaaagtcttgagaaggtgcagacggagaaccccgtgtac
ggaaccctactcaacactgcgtacatcaacgaactgaacgatcacctcgagaagctcgag
aagttctccgagatggtcgagaacaccatcgacctcgacgacctcgccaaccacaactac
acgcttcagccctcactcgacagtgaactggagagaatccgcggcgaccttgtcgatgtt
cgcgaccagctcgacgctgagcatcggcgtgttggtgctgatcttggcgtcgacatcgac
aagaagctccatctcgagaaccaccatgtgtacaaatactctttccgcatcacgaaggcc
gaggcaagcctgctgcgaggcaagaaacagttcatcgagctgtcgacgcagaagtcggga
accatcttcaccacagcgactcttcgcgaggccagtgatgactttgcgcgcttgcaggag
gagtacgaggcgaagcagcggcatcttgtcaaggaagttgtaggcattgcctcgtcgtac
acacctgtactcgagcttcttgacaacataatcgccgcaattgacgtcacggtgagcctc
gcacacgtgtcgtcgcacgcgccagtaccgtacgtcaagccagtgatgaaggagcgcgga
ggaggggacgtcgttgtacgcggggcgcgccatccgtgcctcgaggtgcaggacgacatc
cagttcatttcaaacgaccacgagatgcgcaaaggctcgagcgagttccaaatcctcaca
gggcccaacatgggcggcaagtccacctacatccgcgagatcggcgtgattgcgctcatg
gcgcagctgggctgctttgtaccggccgacagtgccgagttgcccatcttcgactgcatt
ttggcgcgtgttggcgctggcgacagtcaactcaagggcgtctcgacgttcatggccgag
atgctggagacggcgacgatcctgcgatcggcgacgcgagattcgctcatcatcatcgac
gagctgggccgcggtacatcgacgtacgacgggttcggcctggcgtgggcaatctcagag
cacatcgcgagccagatccgctgtttctgcctcttcgcaacgcactttcacgaactcacc
acgctcgcggaccacattagatgggtcaagaaccttcaggtccgcgccgaggtgcagcct
gctgctgccgggtcgaagcaagatcgccaaattacgctcctgtaccaggtgatcgatggg
cacagtgaccagagtttcggtatccacgtcgctgagctcgcgcgcttcccagagccggtt
gtacggttggcaaagcgcaaggccgaggaactcgaggactttggcgagggtgacgcctca
cctgctgctaaactgcccaaggaggaagtagacgcaggcactgagatcgtgcactcattc
ctggacgagtggcggcggcgcgcagagggcggggatggggaggttcagctggccgctctc
cgcgcggccgtcgacgagtacaaggacaagtttgaaggcaacgcgtggatcacgaacgtc
ctcggatcgttacatctgtcctcctctggtcggatcttcacacacgaaaacgctcccacc
ttcccctccctattcaccatgtttgcgcagctcctcaccggcgccctcttcgccactgtg
accaatgcccaggtcaccgccaccggcaccatgggcgtgaccaacccctcggccgctgtc
atgggcactcccatcaaccagacgtccgaggcgcgcctgctctcgctcaactctatcaac
gacttctgcatctttgggcccctcttgcccaactcggtcgttggtgacaccgaggaggag
caggtcgcctggtgtgtccagccccgcaacaacgcccgcgtcattccggacggtacgatc
cactccgcccacctcgtcaagacgccccgttactggcagattcagggttacggcgacttt
acccgcatgaacattgctgccggcgacaatggtggcgagctcgacccccacggtgccaag
ggcaccggaaacccaatcggcggcaacgtaacctccaacgcgactggtacggacgtctcg
tacgaggagtggatgaactttatgtcgttcaacactttctgcctgcgcatttgtatcgcc
gaggagggtgcgtacactgccgagcagcagtgccagcacgagatcgacctcatgggctgc
gagtgggtcatgcctggcgactacaccaacaactcgttcaccgagtgccaggccgactcc
gcctacccacccggctggttcccgcagcccgacggctccgtctctaccttccaccagcgt
tacactggcaccaactcgcctgacggtgcgctgtggactatcggcgttaccgtgacccct
cctgcgccattctcgacccccgcctctagccagtgcacgaccttctcgtcgatcggcaac
ggtatcccccccgagagcctgaaccgcgacgcggcgttcacgtggtctggctctcttccc
gcaactggcggcggatcccccgccgccgccaccggcagtaattcaggcggtcaggcctca
gcgtcggccggtgttgacgcagcctccgctggccagggcagtgaccaagccaagagcgcc
gcgggtcctggctacgtcatcgctggtgcatcgctcgccgccatgctcattggcgttgcc
gccgtcgctctctag

DBGET integrated database retrieval system