Cutaneotrichosporon cavernicola: CcaHIS019_0106850
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Entry
CcaHIS019_0106850 CDS
T09540
Symbol
PRP22, CcaverHIS019_0106850
Name
(RefSeq) uncharacterized protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CcaHIS019_0106850 (PRP22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccac03041
]
CcaHIS019_0106850 (PRP22)
Enzymes [BR:
ccac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CcaHIS019_0106850 (PRP22)
Spliceosome [BR:
ccac03041
]
Complex C
Other components
Step II factors
CcaHIS019_0106850 (PRP22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
S1
DEAD
AAA_22
nSTAND3
AAA_30
T2SSE
PhoH
AAA_19
NB-ARC
TsaE
ABC_tran
AAA_16
ATPase
Motif
Other DBs
NCBI-GeneID:
85491838
NCBI-ProteinID:
XP_060453233
UniProt:
A0AA48L0T6
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All DBs
Position
1:complement(join(1846896..1850393,1850431..1850562))
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AA seq
1209 aa
AA seq
DB search
MSANKGTDKELYKLELLSLVSRISQDIFNETRVQDKTVAEFVISTHEKSKGNYADFVNAL
NKLNANFSDDFMKKLDRTIVTQHPKYKRKAAKAKAKAAAGKNVGAGGDTAKALQARKFPG
LAMPDQGWKSEDDYLRERENKEGAEVVPDFLVDSTMKQLESVAARRGRPAADDYMDGEPS
SKRPRNDYGRGDRDRGYDRDRGYERDNGYAGRDNGWAGRGGPPRDSRDERRGRPGLDDRP
LLYKIYNGTVSNVRDFGGFVALEGVAGRQEGLVHVSNITGARLETANEGIQRGQRVKVKV
MSITGSKIGLSMKDVDQTTGEDLSPHMRERSAEEMAADRQRMAARIGTGANAAPLHGRGE
PVPEAMSGDRRVTGSAKRLSSPERFEIKQLIASGAVSAADYPDLDDDFNNPDREEVEQDV
DIEVSEKEPAFLAGQTKVTLDISPVKIIKAPDGSLNRAALAGGEQARERREIRRLEANDE
MDKQAKNVTQPWLDPMAQPGDRQFASDLRGQQQPKPTWKSANKGVVTFGRITSLSIEEQR
RALPIYKLRDQLVKALKENQILVVVGDTGSGKTTQMAQYLAEEGMLGNGRLGCTQPRKVA
AVSVAKRVAEEVGCRLGAQVGYNVRFEDVTSPETKIKFMTDGMLLRELLVDPDATKYSVI
MLDEAHERTIATDVLFGLMKKACKRRPDLKLICTSATLDAEKFAKYFYGCPIFTIPGRTF
PVEVLYTKEPESDYLEASLITILQIHLMEPPGDILLFLTGQEEIDTSCEILSERIQALGP
AVPELLVLPMYAALPSAMQSRIFDPPPPGARKCIIGTNIAETSITIDGIYYVIDPGFAKQ
NAYDPKLGMDSLIVTPISQAQARQRAGRAGRTGPGKCYRLYTELAFRNEMLPNPIPEIQR
TNLAATILTLKAMGVNDLINFDFMDPPPAATMLMALEALYALGALDDEGLLTRVGRKMAD
FPLDPPLCKMLIKSVDYGCSEEALTIVAMLQAGGQIFYRPKEKQAQADAKKAKFHQPEGD
LLTLLAVYNGWKASNFSKPWCYENFIHERAMITAQNVRKQLVGIMDRYKHDLVSCSTDYN
RVRMAICSGFFRNAAKKDPMEGYKTLVESTPVSIHPSSALFQRQPEWCIYYTLILTAKEY
MHQVTVIEPKWLQEVAPTFFKVADANKISKRKQGEKIEPLFDRFAETKDDWRLSRQKRVV
HNSQSFSNN
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaacaagggaacagacaaggagctgtacaagctcgagctcctctcgctcgtc
tcgcgcatctctcaagacatcttcaatgaaaccagagtccaggacaagactgtcgccgag
tttgtcatctctacgcacgagaagagcaagggaaactatgccgactttgtgaacgcttta
aacaagttgaacgccaacttcagcgacgactttatgaagaagctcgaccgcacaatcgtc
acgcaacacccaaagtacaagcgcaaggctgccaaggccaaggccaaggctgctgcggga
aagaatgtcggtgccggcggtgacactgccaaggctctgcaagcgcgcaagttccccgga
ctcgcgatgcccgaccaggggtggaagagcgaagacgactacctgcgagagcgcgagaac
aaggagggcgccgaggtcgttcctgactttttggtggacagcaccatgaagcagctcgag
tctgtggcggcgcggcgtggacgacctgccgcagacgactatatggacggcgagccaagt
tccaagcggccacggaacgactatggccgcggggaccgggatcggggatacgaccgtgac
cgcgggtacgagcgtgataacgggtacgcaggacgagacaacggatgggctgggcgcgga
ggaccaccgcgcgactcgagggatgagcgccgtgggcgacctggcctcgacgaccggccg
ctgctgtacaagatctacaacggcaccgtctccaacgtccgtgactttggcgggtttgtc
gcgttggaaggcgtcgccgggcgccaggagggtcttgtacacgtgtccaacatcaccggt
gcgagactcgagacggccaacgagggaatccagcggggtcagcgcgtgaaggtcaaggtt
atgtcaatcacagggtcaaagatcgggctgagcatgaaggacgtcgaccagaccactggc
gaggatctttcaccgcacatgcgcgagcggtcagcggaggagatggcggcggatcggcag
cgcatggcggcgcggataggcactggcgccaacgcggcgccattgcacgggcgtggcgag
cccgtgcccgaggcaatgtctggagaccggcgcgtgactgggagtgcgaagcgactttcg
agtcccgaacggttcgagatcaagcagttgatcgcgtccggtgccgtcagcgcagccgac
taccccgaccttgatgacgactttaacaaccctgaccgcgaggaggttgagcaggacgtc
gacattgaggtcagcgagaaggagccggcgttcctggcaggccagaccaaggtcacactc
gacatctcgccggtaaagattatcaaggcgccagacgggtcgctgaatcgcgctgccctt
gcgggtggagaacaggcgcgcgagcggcgcgagattcgtcgcttagaggccaacgacgag
atggacaagcaggccaagaatgtcacgcagccatggcttgacccgatggcccaacctggc
gaccggcaattcgcctcggacctgcgtgggcagcagcagcccaagcccacttggaagtcg
gcaaacaagggggtggtgacgttcggtcgcatcacgagcctgagcattgaggagcagcgg
cgcgctctacccatttacaagctgcgcgatcagctcgtcaaggcactcaaggagaaccaa
attcttgttgttgtcggcgacacggggtccggcaaaacgacacagatggcgcagtacctc
gccgaggagggtatgctcggaaacggacgcttgggttgcacacagccgcgtaaagttgcc
gctgttagtgttgccaagcgtgtcgctgaggaggtcgggtgtcgcctcggcgcccaggtc
ggatacaacgttcgtttcgaggacgtgacgtcacccgagaccaaaatcaagttcatgacg
gacggaatgctgctgcgtgagctgctcgtcgacccggacgcgaccaagtacagcgtcatc
atgctggacgaggcgcacgagcgcacgatcgcaaccgacgtcctctttggcctgatgaag
aaggcgtgcaagaggcgccctgaccttaagctgatctgcacgtcggcgacacttgacgca
gaaaagttcgccaaatacttctacggatgcccgatcttcaccatccccggccgcacattc
cccgtcgaggtgctgtacaccaaggagcccgaaagtgactacctcgaggcgtcacttatc
accatccttcagatccatcttatggagccgccgggtgacatcctcctcttcctcacagga
caagaggagatcgacacgtcatgcgagatcctgtccgagcgaatccaggcgctcggaccg
gcggtgccagaactcttggttctgccaatgtacgcggcgctgccgagcgcgatgcagtcc
cgcatcttcgacccccctccacccggcgcgcgtaagtgcatcatcggaacgaatattgcc
gagacgagtatcaccatcgacggcatctactatgtcattgacccgggctttgccaagcag
aacgcctacgaccccaagctcggcatggactcgctcatcgtcacacccatctcacaggcc
caggcgcggcagcgagcaggccgcgcggggcgtaccggtccgggcaagtgctaccgcttg
tacaccgagttggcgttccgcaacgagatgttgccaaatccgattcccgagatccagcgc
accaatcttgcagcaacgattctcacgctcaaagcgatgggtgtaaacgaccttatcaac
tttgactttatggaccccccgccagccgcaacaatgttgatggcgctcgaggcgctgtac
gctctcggtgcgctcgacgatgagggtctcctcacgcgcgtgggtcgcaagatggccgac
ttccccctcgaccctccgttatgcaagatgctcatcaagagtgtcgactatggatgttcc
gaggaggcgctcacgatcgtcgccatgctccaggccggcggacagatcttctaccggcca
aaggagaagcaagcgcaagcagacgccaagaaggccaaattccaccagccagagggcgac
ctgctcaccctcctggcagtgtacaacggatggaaggcgtccaacttttccaaaccgtgg
tgctatgagaactttatccacgagcgcgcgatgatcacggcccaaaacgtccgcaagcag
ctggtgggcatcatggaccggtacaagcacgacctggtatcgtgcagcaccgactataac
cgagtccgcatggcgatttgcagtggctttttcaggaatgcggccaagaaggacccaatg
gagggatacaagacgctcgtggagagcacgcccgtctcgatccatccttcgagtgcgctg
ttccagcgccagccagagtggtgtatctactacacgctcatcctcacggccaaggagtac
atgcaccaggtgacggtgatcgagcccaagtggctgcaggaggtcgcgccgactttcttc
aaggtcgccgacgccaataagatcagcaagcgcaagcagggtgagaagattgagcccctg
ttcgaccggttcgccgagaccaaggacgactggcgactcagcaggcagaagcgcgtcgtg
cacaactcgcagagcttctccaacaactag
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integrated database retrieval system
