KEGG   Cutaneotrichosporon cavernicola: CcaHIS019_0109880
Entry
CcaHIS019_0109880 CDS       T09540                                 
Symbol
RPC10, CcaverHIS019_0109880
Name
(RefSeq) uncharacterized protein
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
ccac  Cutaneotrichosporon cavernicola
Pathway
ccac03020  RNA polymerase
ccac03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CcaHIS019_0109880 (RPC10)
  09124 Replication and repair
   03420 Nucleotide excision repair
    CcaHIS019_0109880 (RPC10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccac03021]
    CcaHIS019_0109880 (RPC10)
   03400 DNA repair and recombination proteins [BR:ccac03400]
    CcaHIS019_0109880 (RPC10)
Transcription machinery [BR:ccac03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CcaHIS019_0109880 (RPC10)
  RNA polymerase III system
   RNA polymerase III
     CcaHIS019_0109880 (RPC10)
  RNA polymerase I system
   RNA polymerase I
     CcaHIS019_0109880 (RPC10)
DNA repair and recombination proteins [BR:ccac03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CcaHIS019_0109880 (RPC10)
SSDB
Motif
Pfam: DNA_RNApol_7kD TF_Zn_Ribbon zf-C3HC Zn-ribbon_8 DZR GFA DZR_2 DUF1451 DUF5816 DUF6083 HypA zf-NADH-PPase zinc-ribbon_6 DUF951 OrfB_Zn_ribbon Zn_ribbon_recom
Other DBs
NCBI-GeneID: 85492141
NCBI-ProteinID: XP_060453536
LinkDB
Position
1:complement(join(2658633..2658653,2658714..2658718,2658766..2658858,2659050..2659146))
AA seq 71 aa
MSNPYQSSRPDESHMPKRDAPKPTEASEYLCGDCGHKTSIKMGELIRCRECGHRVMYKPR
THKTVVQFEAR
NT seq 216 nt   +upstreamnt  +downstreamnt
atgagcaacccgtaccagtcgtcgcgtcccgatgagtcgcacatgcccaagcgcgatgcc
cccaagcccaccgaggcgagcgagtacctctgcggtgactgcggacacaagacgtcgatc
aagatgggcgagcttatccgttgccgcgagtgcggacaccgtgtcatgtacaagccgcgt
acccacaagacagttgtccagttcgaggcgcggtag

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