KEGG   Cutaneotrichosporon cavernicola: CcaHIS019_0110380
Entry
CcaHIS019_0110380 CDS       T09540                                 
Symbol
CcaverHIS019_0110380
Name
(RefSeq) uncharacterized protein
  KO
K12857  Prp8 binding protein
Organism
ccac  Cutaneotrichosporon cavernicola
Pathway
ccac03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CcaHIS019_0110380 (CcaverHIS019_0110380)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccac03041]
    CcaHIS019_0110380 (CcaverHIS019_0110380)
Spliceosome [BR:ccac03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    CcaHIS019_0110380 (CcaverHIS019_0110380)
 Complex C
   U5 SnRNP specific factors
    CcaHIS019_0110380 (CcaverHIS019_0110380)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_IFT122_1st NBCH_WD40 WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_NWD2_C Beta-prop_IFT140_1st PQQ_2 TibC_1st Beta-prop_NOL10_N DUF7411
Other DBs
NCBI-GeneID: 85492191
NCBI-ProteinID: XP_060453586
UniProt: A0AA48I756
LinkDB
Position
1:complement(join(2786227..2786302,2786348..2786508,2786794..2786850,2786888..2787288,2787336..2787408,2787471..2787677))
AA seq 324 aa
MSVRKSPPPSGPGMAVAKRARVEDDDEENTMTLTVASSGEGQRKNALVRTIKRTSGLEAP
IVSLAGAHGGEITACKFDPRGETIAACSIDRGISLWKTYPPHDNYGLIPHVHKQAVLDIA
FSLDSRVLYSGGADGYLIATDLEDGSRVAKYAAHFGPLNSIAVAISGGHELVLTGGDDGI
ARVWDLSLGTKDPVAEFDDERDCPVTAVEWSHDGNQCFVGGVDNEVKVWDLRTEKMLYSL
KGHTDTTLIRCAWSKHDGGQRIAAGGGDRTVTVWDVQTGKILYKLPGHKGAVTGVDLHPR
EPIILTGSKDSNMLLGELDAQDFS
NT seq 975 nt   +upstreamnt  +downstreamnt
atgtcggtccgcaagtcccctccgccctcggggcctggaatggctgttgcgaagcgtgcg
cgcgtcgaggacgatgacgaggagaacacgatgaccctgactgttgcgtcgtcgggcgag
gggcagcgcaagaatgcgctggtgcgcacgattaagcgtacaagtggactcgaggcgccg
atcgtgtccttggctggggcccacggaggcgaaatcacagcgtgcaagtttgacccaaga
ggggaaacgatcgcagcgtgctccattgatcgtggtatctcgttgtggaagacgtacccc
ccacatgacaactatggtctcatcccgcacgtgcacaagcaggccgtgctggatatcgcg
ttctcactcgactcgagggtgctctactctggcggcgcggacgggtacctcatcgcgact
gacctggaggacggctcgcgcgtagccaagtacgccgcgcactttggtccgctcaactcg
attgctgtggcgatctcaggagggcacgagctggtgttgactggtggggatgacgggatt
gcgcgcgtgtgggacttgtcgctgggtaccaaggacccagtggcggagtttgacgacgag
cgcgactgtcccgtgacggcggtggagtggagccacgacgggaatcagtgcttcgtgggt
ggtgtcgacaacgaggtgaaggtgtgggatctgcggacagagaaaatgctgtactcgttg
aagggacacacggacactacgctgatccgctgtgcgtggtccaagcacgacgggggacaa
cggatagcagcgggtggcggagaccgtacggtgacggtgtgggatgtgcagacgggcaag
atcctgtacaaacttcccggccacaagggcgcagtgaccggcgtcgacctgcatcctcgg
gaacccatcatccttacggggtccaaggactcgaacatgcttctcggcgagctcgacgcg
caggacttttcttga

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