Cutaneotrichosporon cavernicola: CcaHIS019_0201420
Help
Entry
CcaHIS019_0201420 CDS
T09540
Symbol
RPD3, CcaverHIS019_0201420
Name
(RefSeq) uncharacterized protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03082
ATP-dependent chromatin remodeling
ccac03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CcaHIS019_0201420 (RPD3)
03083 Polycomb repressive complex
CcaHIS019_0201420 (RPD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccac03036
]
CcaHIS019_0201420 (RPD3)
Enzymes [BR:
ccac01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CcaHIS019_0201420 (RPD3)
Chromosome and associated proteins [BR:
ccac03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
CcaHIS019_0201420 (RPD3)
HDAC complexes
Sin3A-HDAC complex
CcaHIS019_0201420 (RPD3)
BRAF-HDAC complex
CcaHIS019_0201420 (RPD3)
REST complex
CcaHIS019_0201420 (RPD3)
SHIP complex
CcaHIS019_0201420 (RPD3)
MiDAC complex
CcaHIS019_0201420 (RPD3)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
CcaHIS019_0201420 (RPD3)
Heterochromatin formation proteins
Other heterochromatin formation proteins
CcaHIS019_0201420 (RPD3)
Chromatin remodeling factors
NuRD complex
CcaHIS019_0201420 (RPD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
85492651
NCBI-ProteinID:
XP_060454046
UniProt:
A0AA48I6J6
LinkDB
All DBs
Position
2:join(354464..354487,354545..354590,354642..354724,354760..354877,354914..356415)
Genome browser
AA seq
590 aa
AA seq
DB search
MGEDKKRVCYFFDSDIGNYHYGPGHPMKPTRIRMCHSLVMNYGLYKQMEIFRAKPATKRE
MSQFHTDEYVDFLYRINPDNESQFNKEQGKYNVGDDCPIFDGLFEYCSISAGGSMEGAAR
LSRDKCDIAVNWAGGLHHAKKAEASGFCYVNDIVLGILELLRYHPRVLYVDIDVHHGDGV
EEAFYTTDRVMTCSFHKYGEFFPGTGDINDIGINKGKGYAINIPLRDGISDESYKSIFRP
VMKRIIEWYQPGAIVLQCGSDSLAGDRLGSFNLSMRGHAACVQYIKSFNLPLLMLGGGGY
TVKSVSRTWAYETGLAAGVELGGQIPNNEYYEYYGPDYELDVKPSNMTDHNRREYLDKIR
EQVFEKLRDNSAAPGVQMHSVPKLAHDDEDGNEGEDNEDPDDRRPMRLWDKEKQHEATLS
DSEDEGLGGRRHHQSHREGSDKASSKRRRSKSPRLVSGPGSAAGQPAADRSTSVAPVAGT
AAAAATVAPSTGTLPVAAPNAPSASMDIKRWAAGVEGGVETSGSGSKPASASPKPVAADD
GDVEMADVSGDPKPAEPAAEPTTGEESMETAEEPGTLCGAGAGDHVAEGA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgggggaggataagaagcgagtttgttacttttttgactctgacattggcaactaccat
tatgggccaggccaccccatgaagccgacgcgtatccgcatgtgccattcgctggtcatg
aactatggattatacaagcagatggagatcttccgcgccaaacctgctacgaagcgggaa
atgtcccagttccataccgacgagtacgtcgacttcctgtaccgcataaacccggacaac
gagagccagttcaacaaggagcaaggaaaatacaatgtcggtgacgactgcccgatcttt
gacggtctgttcgagtactgctcgatttcggctggaggctccatggagggtgcggcgcgc
ctgtcgcgcgacaagtgcgacattgcagtcaactgggctggtggcctgcaccacgccaag
aaggcagaggcgagcggcttctgctacgtcaacgacattgtgcttggcatcctcgaactg
ctgcgctaccatccgcgcgtgctatacgtcgacattgacgtgcaccacggtgatggtgtg
gaggaggcgttctacaccaccgaccgggtcatgacctgcagcttccacaaatatggcgag
ttctttcctggcaccggcgacatcaacgacatcggcatcaacaagggcaagggctacgcg
atcaacatccccttgcgcgacggcatcagcgacgagtcgtacaagagcatcttccggcct
gtcatgaagcgcatcatcgagtggtaccagcctggcgcgattgtgttgcaatgcggctcg
gactcgttggctggcgaccgcctcggttcgttcaacctctcgatgcgcggccacgctgca
tgcgtacagtacatcaaatcgttcaaccttcctcttctcatgctcgggggcggtgggtac
acggtcaagagtgtgtcgcggacgtgggcgtacgagacgggtctggctgcaggcgtcgag
ctcggcggccagatccctaacaacgagtactacgagtactatggccccgattacgagctc
gacgttaagccatccaatatgacggaccacaaccggcgcgagtacctggacaaaatccgg
gagcaggtgtttgagaagttgcgcgacaattcagcagctccgggtgtccaaatgcactct
gtgcccaagctggcgcacgacgacgaggacgggaatgaaggcgaggataacgaagaccca
gacgaccgccgtcccatgcgcctgtgggacaaggagaagcagcacgaggcgacgctgtct
gactcggaggacgagggcctcggtggacgccgacaccaccagagccaccgcgaggggtcg
gacaaggcgtcgagcaagcgtcgcaggtcgaagtcaccgcggctcgtctcaggtccaggc
tcggcagcgggacagcccgcagcggaccggtccacatccgtggcgccggtggctggcaca
gctgcggcggcagcaaccgtggcgccgtcgaccggcacgctacctgtcgcggcgccgaac
gcgccttctgcgagcatggacataaagcgatgggcggctggggttgagggcggtgtcgag
actagtgggagcggcagtaagcccgcatcggcgtcgccaaaacctgtggcggcagacgat
ggtgacgtcgagatggcggacgtgagcggcgacccgaagccggccgagccagcagccgag
ccgaccaccggggaagagtcaatggagacggccgaggagccagggacgctatgtggagcg
ggcgcaggcgatcatgtcgctgagggcgcatag
DBGET
integrated database retrieval system
