Cutaneotrichosporon cavernicola: CcaHIS019_0202200
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Entry
CcaHIS019_0202200 CDS
T09540
Symbol
NUP49, CcaverHIS019_0202200
Name
(RefSeq) uncharacterized protein
KO
K14307
nucleoporin p58/p45
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CcaHIS019_0202200 (NUP49)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccac03019
]
CcaHIS019_0202200 (NUP49)
Messenger RNA biogenesis [BR:
ccac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CcaHIS019_0202200 (NUP49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
Tn7_Tnp_TnsA_C
Motif
Other DBs
NCBI-GeneID:
85492729
NCBI-ProteinID:
XP_060454124
UniProt:
A0AA48IF30
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All DBs
Position
2:join(564431..565281,565315..565417,565453..565947)
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AA seq
482 aa
AA seq
DB search
MSFGSFGKPATPFGAAAAPAPSPFGQAAQPAAGLFGSASNAPAAGTSLFGQQQNANPSAG
TSLFGQQQQQPQASGLFGGQQQAATTGGGLFGSQQASTSTGPTGGLFGQQQAQPQSSGLF
GQQNQTQQQGASLFGQQQQQQPQPQSSSFGKPAGGLFGSTTAQPSGGLFGSTAAAPQPAG
GLFGQQQPQQQGGLFGQQSATQPAAGGLFGQQSTAQPAGGLFGQQSTAQPAGLFGQQNSV
LGQQQQGSSLFNKPAPAQSQSSGIGKTRLADLPENVQKVIEQLDAGIKDQKQVGASIDMT
NIGRAIWQTSADVKAASDEQAALAQGLYSLRASLEQLATRVNEQATDLQKLLETWEAAKP
LERRNGNIRPIAHRDFPQEYFFRVAKNLEERVQRYRRNIMLLHRAIVGLATDAEALTPPV
VVQTMQNNQATIISLAAQLDQLQLRMNALRTEFTDDYREKTNSMRDPFEVAREGKGVSLL
RA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttggttcgttcggcaagcccgcaacaccattcggggcggcagctgctcccgct
ccctcaccattcggacaggccgcacagcccgccgccggactgttcggctcggcatcgaat
gcgcccgccgcaggcacctcgttgtttgggcagcagcagaacgcgaacccgagcgcaggg
acctccttgtttgggcagcagcaacaacaaccacaggcgtcgggactgtttggcgggcag
cagcaggcggctaccacgggcggcgggctgtttgggtcgcagcaggcgtcgacgagcacg
gggccaactggcgggctgtttgggcagcagcaggcccagccgcagagctcgggactgttc
gggcagcagaaccagacccagcaacaaggggcgtcgttgttcggacagcagcagcagcaa
cagccgcaaccgcagtcgagctcgttcggcaagccagctggcggcctgttcgggagcacg
accgcccagccttctggcggcctcttcgggagcacggccgccgcgccgcagcctgcaggt
ggcttgttcgggcagcagcagcctcagcagcagggtggtctgttcgggcagcagagcgcg
acgcagccggcggcgggaggactgtttggacaacagagtacggcgcagcccgccggtggg
ctcttcggacagcagagcacggcccagcccgcaggactgtttggacagcagaactcggtg
ctcgggcagcagcagcagggttcatcgctgttcaacaagcctgcgccggcgcagtcgcag
agctctgggatcggcaagacgcgtctcgcggacctgccggagaacgtgcagaaggttatt
gagcagcttgatgcgggaatcaaggaccagaagcaggttggcgcaagcatcgacatgacc
aacattgggcgcgcgatctggcagacgagcgccgacgtcaaggccgcgagcgatgaacaa
gcggcgctggcgcaggggctctactctctccgtgcgtcgctcgagcagctcgcgacgcgc
gtcaacgagcaggcgacagacctccagaagctcctcgagacgtgggaggccgcgaagcct
ctcgagcggagaaatggcaacatccggccgatcgcgcaccgcgactttccgcaggaatac
ttcttccgcgtcgccaagaacctcgaggagcgcgttcagcggtaccggcgcaacattatg
ttgcttcaccgcgccattgttgggcttgcgaccgacgccgaggcactcacgccaccggtc
gttgtgcaaacgatgcagaacaaccaggcaacgattatatcgctcgcggcgcagctcgac
cagctgcagctgcggatgaacgcgctgcggaccgagtttacggacgactaccgcgagaag
acgaatagcatgcgcgacccgttcgaggtcgctcgcgaggggaagggcgtcagcctgctg
cgggcgtag
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