Cutaneotrichosporon cavernicola: CcaHIS019_0202400
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Entry
CcaHIS019_0202400 CDS
T09540
Symbol
tfs1, CcaverHIS019_0202400
Name
(RefSeq) uncharacterized protein
KO
K03145
transcription elongation factor S-II
Organism
ccac
Cutaneotrichosporon cavernicola
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccac03021
]
CcaHIS019_0202400 (tfs1)
Transcription machinery [BR:
ccac03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CcaHIS019_0202400 (tfs1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
Zn_ribbon_Elf1
PDXDC1-like_cen2
AC_N
Motif
Other DBs
NCBI-GeneID:
85492749
NCBI-ProteinID:
XP_060454144
UniProt:
A0AA48IIC5
LinkDB
All DBs
Position
2:complement(join(604241..604270,604314..604320,604394..604404,604439..604531,604567..604763,604798..604887,604934..605411,605497..605634))
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AA seq
347 aa
AA seq
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MSMDAAALSAAIKEMQEANEAGKSDDVVRLLKKFKTDVVATEDMLRQSRAGIAIGKLRSH
GTAEVSALAKDVVRLWKEQVEENKRKRKRDDEGGSEAKKAKAGSPAKSPAVKSPSSKPVS
KGKEGKEGKEGKEEKKEKETVGEREKSKTPETLVTIDYGRTTPRTAKSDGVDKNLRSDGS
DAAPEDVRDRCVVMIYDALASDSNASTKTLSQCAIAIERECCKLMNYDTGKPYRAKIRTL
FLNLKDKGNPALRNEIVLGQMTADRVVRLTTEEMASESMKAMNERIQEQNLFNSKGVGEV
QAETDAFKCGRCGQRKCVYFQMQTRSADEPMTTFVTCTVCGLRWKFS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagcatggacgcggcggcactgagcgctgcgatcaaggagatgcaggaggcgaatgag
gctgggaagagcgacgacgtggtccgcctcctcaagaagttcaagacggacgtcgtggcc
accgaggacatgttgcgtcaatcacgcgcaggtatcgctattggcaagctgagatcgcac
ggtacggcagaggtttccgcgctggccaaggatgttgtccggctgtggaaggagcaggtg
gaagagaataagcgcaagcggaagcgcgatgatgaggggggtagcgaggctaagaaggct
aaggctgggtcgccagctaagagccccgccgttaagagtccttcgtccaagcccgtgtcc
aagggtaaggaaggcaaggaaggcaaggaagggaaagaggagaagaaggagaaggagact
gtcggggagcgggaaaagagcaagacgcctgagacgctcgttacgattgattatgggcgc
acaacaccgcgtacggctaagagtgatggtgtcgacaagaacctgcggagcgatggctcg
gatgctgcgcccgaggatgtgcgcgaccggtgtgttgtcatgatctacgatgcgctggcg
agcgactctaatgcctcgaccaagacgctctcgcagtgcgcgattgcgatcgagcgcgaa
tgctgcaagctcatgaactacgacacgggcaagccgtaccgcgcaaaaatccgcacactc
ttcctcaacctcaaggacaaggggaatccggcgttgcgcaacgagatcgtgctgggccag
atgacggcggaccgcgtcgtgcggttgacaaccgaagagatggcgagcgagtcgatgaag
gccatgaacgagcgcatccaggagcagaacctcttcaactcgaagggcgttggcgaggtc
caggccgagacggacgcgttcaagtgtggccgctgtggtcagcgcaagtgtgtctacttc
cagatgcagacgcgctctgccgatgagccgatgactaccttcgtgacttgcacagtttgt
ggcctccgctggaagttcagctag
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