Cutaneotrichosporon cavernicola: CcaHIS019_0202770
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Entry
CcaHIS019_0202770 CDS
T09540
Symbol
CcaverHIS019_0202770
Name
(RefSeq) uncharacterized protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CcaHIS019_0202770 (CcaverHIS019_0202770)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccac03019
]
CcaHIS019_0202770 (CcaverHIS019_0202770)
Messenger RNA biogenesis [BR:
ccac03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
CcaHIS019_0202770 (CcaverHIS019_0202770)
U7-dependent histone pre-mRNA processing factors
CcaHIS019_0202770 (CcaverHIS019_0202770)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_MUD2_C
RRM_10
DUF8400
RRM_5
RRM_occluded
RRM_11
RRM_PARP14_3
RRM_3
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
85492786
NCBI-ProteinID:
XP_060454181
UniProt:
A0AA48I6S4
LinkDB
All DBs
Position
2:complement(join(691322..691351,691390..691473,691509..691916,691985..692436,692472..692502))
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AA seq
334 aa
AA seq
DB search
MPPQSTRTVFVANVPYDVSEEQIAGVFSEVGPVSHVEIKFDPQTGKSKGYAFVQFYDEAA
AQSAMRNLQEVPINGRPVRIELSNDERMTRRPGAPFAGAAGVAGAGAGGAGGRRDSPTPI
DHSLMPQGTEVGPGQKATDAISKTLAEVNPGQMQEVMAGMKALITTQPDEARRLLTAKPQ
LAYALFQAMLLMNIVDPSVLQRIQPLPPSAPAAPQAAYSGYQREGYYPPPPAPAAQQPPF
RQQPPQPAYGAPPPAQQSGYGGGYGRSAPPAPPAPAAPPALPPATQAALAGLPEDQKAML
MQVLQLTPDQINALDAEQQASVRQLRAQFLGASA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgccacctcaaagcacccgcaccgtcttcgtcgccaacgtaccgtatgacgtctctgaa
gaacagattgccggcgtcttctctgaagtcggccccgtctcgcacgtagagatcaagttc
gacccccaaacaggcaagagcaaggggtacgcttttgtgcagttctacgacgaggccgcc
gcccagagcgccatgcgcaacctccaagaagtacccatcaatggacggccagtccggatc
gagctgagcaacgatgagcgcatgacccggcgtcccggtgcgccgtttgctggtgctgct
ggtgttgctggtgctggggctggaggggctggagggaggcgcgactcgcccacgccaatc
gatcatagcttgatgccccagggaacagaagttgggccgggacaaaaggcgaccgacgct
atttcaaagacgttggcggaagtcaacccgggccagatgcaggaggtcatggccgggatg
aaggccctcataaccacgcagcccgatgaggcgcgccgcctcctcaccgccaagccccag
ctcgcgtacgccctcttccaggccatgctgctcatgaacattgtcgacccgagcgtgtta
cagcgcatccagccgctgccacccagcgcgcccgcagcaccacaggcagcgtactcggga
taccagcgcgagggttactaccctcctccgcctgctccggcggcgcagcagccgcccttc
cgccagcagcctccgcaacccgcgtatggtgctcctcctccagctcaacagtctgggtat
ggtggaggttacggccggtctgctcccccggcgccgccggcgccagctgctcctcccgct
ctgccgcccgcgacgcaggctgctctggcaggcctccccgaggaccagaaggctatgctc
atgcaggtcctccagctcacgcccgaccagatcaacgccctcgacgccgagcagcaggcg
tccgtcaggcaacttcgcgcccagttcctcggagcaagtgcatag
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