Cutaneotrichosporon cavernicola: CcaHIS019_0204740
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Entry
CcaHIS019_0204740 CDS
T09540
Symbol
SRB8, CcaverHIS019_0204740
Name
(RefSeq) uncharacterized protein
KO
K15163
mediator of RNA polymerase II transcription subunit 12, fungi type
Organism
ccac
Cutaneotrichosporon cavernicola
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccac03021
]
CcaHIS019_0204740 (SRB8)
Transcription machinery [BR:
ccac03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
CcaHIS019_0204740 (SRB8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med12
Med12-LCEWAV
Motif
Other DBs
NCBI-GeneID:
85492983
NCBI-ProteinID:
XP_060454378
UniProt:
A0AA48I4C3
LinkDB
All DBs
Position
2:join(1219988..1220174,1220279..1220388,1220420..1220541,1220677..1222564,1222601..1224418,1224454..1225332)
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AA seq
1667 aa
AA seq
DB search
MPTPRYAQAGVRAAHPSHGTKAPHKRRASGQPASDVPLADPVPIEDFPPPAWRTVLNSRA
DLGYPDFYPSRPGFSQPEDEMTDAFVKSGFSLKPAVNVTAESFSMHGPVYQQLQTGGLER
LMELGREIIAQRNATMPSFQERAFRIPVRVTYNDTKRSQFIADLANPAIPLTRLMRNPVP
HGFKGVELLETMFHPPQPGMRPGAVSAAGKPLPEPIPIDRALWFIRVLGANEISAHRGRA
QPASSMQVPSPAAVTPSSTATSAPAPLPLNSNDWYTAEFTTAFTAWLRMQLAQLVLPTKP
KSGAGVLPPPKTPTGVLGDEKSRARWLAKWQYTNNLLKQLYRKRLVSPRQLVGWLSDFLG
QANLAQIGFVAKLIHENLVDVAENPSISRHCVRSACVKIKEIRASPAKDTMTKVDEQLTA
IVRVLYQSDPEVMLSPTTWVRFSLLVGTIVDSTTPVWTDLERRNTALMFMPIVVDPGPSP
RRQQMAEIHMLDSICAETDMSALCKAYFSGPCAPTSPKIDVAKLEEKVFILVNWAMGLYQ
MGVHRPYAVYTILKKWQQWQEEIRPNDHFDFFPILYQWLDTSIPARKAENVLPIGISFGE
LTRQGLFSYGRYLNRLISHGHSSRFANGKGPISHHIELLRVMPIFVEAPDLLEQRRLVLS
GDGENRDREQAEEDNQLETFRQEMKEYVPEVFGLRRYGKSAFIRESIDYAIPMAAGVTRF
EFVHSRFWLYAAAVHHFKRQGSQPPMDGSTYARVMNVFMQCRGYSTLADFLVKGITATED
PEILLIILDSIKRDADVWTSIDRWNQITSALVARFRAMQRRGGFCAPLVAVLQMLVQHHR
LVDPSAEAEVLNARERHRRASPETPAIAVDIDQSMEGLRQVITTGSVDKAITLASKMFAR
HGKFDLWSATWWQSVIQAVQAGEAGKPNAVNAAVAHISEVIDLAGDGSLRPVFVTWVASL
TPNTRVDLFGRRSVPPVVRMLLMLIVKRILGSHTLLEQVLFPELKHAASLVSGPHPRLSR
KRTYAVEWAVTLAQQLLLCTPHRSLPPVSLREAYVVQTARAAAFHASNVANLIQHLPVFV
VLERSKLVPEKTRNQIGVIFRGLAELPQFKTAAFRNLDVLKDAFLSNDWIKRSNDSSLET
GMVEGLKLMMSDKRSKGSEGLPTLEGGGKYSAWRYTRIVLEMRVEFKRLTMRIANNEEPH
EARKQLSQIVKQSLDREATPDDMDLLVEAFRGADSVVAQEILGVGLERLGDLLQRLLAAE
DQHHVEEAASAVDLVLRVISSIGRQEKLEAAAAVARDRLFNLLTDAFQSLERHVSNEDDV
HMLPGATPPEPGEIIKVVLNLLRFVLSIPSTEVHVPSSPKPDFSSLVVAFLHLGVALCAR
SQGYTDMESMRDLLIFLVDSIPPNSQAAVHHTLVFEASTPAVQDLLARSPSFAGALPPPK
TDYRAMSLCGSSGLMDSDMGIALDDRPWEMIEQMVDQTPLKHCDMFLTSKPLKDTSSIPI
ALFKPQVTRDEVPDAAREGEHPWNYASSERNLGNGFGGEPIAARQAATVLYARGDGNVGD
QPTLAMPPTPARVKRLNPRNNTPVKGAGTNNDPISIESDESEGESVEEQRPASKRPRTGS
KTSTGATRQVTGGKAPRKAAPARKAPAKNVRSTSGKEAKGRRKSGQD
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccccgcgctacgcccaggcaggcgtgcgcgcggcgcacccatcgcatggtaca
aaggcgccacacaagcgacgtgcgagcggccaacccgcctccgacgtaccgctcgcagac
cccgtgcccatcgaggactttccaccaccagcttggcgtactgttctcaactctcgcgcc
gaccttggatacccagacttctacccatctcggcccgggttctcgcagcctgaagatgag
atgaccgacgcgttcgtcaagtcggggttctcgctcaagccagctgtcaatgtaacggcg
gagagcttctccatgcacggcccggtgtatcagcagcttcagaccggcgggttggagcga
ctgatggagctcggtcgtgagatcattgcgcagcggaatgctaccatgccctcgttccag
gagagggcgttccgtatacctgtgcgcgtgacatacaatgacacgaaacggtcacagttc
atcgccgacctggccaaccccgcaattccactgacgcgcctcatgcgcaacccggttccc
catgggttcaaaggcgttgagctcctcgagaccatgttccaccctccgcagccggggatg
cgccctggcgctgttagtgctgctggcaagcccctacctgagccgatcccaatcgacagg
gcactgtggttcatccgagtccttggagccaacgagatcagcgcacaccgcgggcgagcg
cagccggcgtcgtcgatgcaggtacccagtccagccgcggttacccctagttcgactgcc
acatccgcaccagcgcccttgccgctcaactcgaacgactggtacaccgcagagttcact
accgcttttactgcctggttgcgaatgcagcttgcacaactcgtgttacccaccaagccg
aagtctggcgctggggtactgccaccgcccaagacaccgaccggggttctaggagacgag
aagagtcgtgcccgttggctcgcaaagtggcagtacaccaacaaccttctcaagcagctc
tatcgcaagcgcctcgtctccccgcggcaactcgtgggatggctctcggacttccttggc
caagccaacttggcccaaatcggcttcgtcgccaagttaatccatgagaacctggtcgac
gtggccgagaacccgagtatctcacgacattgcgtgcgctcggcttgtgtcaagatcaag
gagattcgcgcttcacctgccaaggacacaatgaccaaagtcgacgagcagctcacggcg
attgtgcgcgtgctgtatcagtctgaccccgaggtcatgctctctccgacaacgtgggtc
cgcttctctttgctcgtcggtacgattgtcgactcgaccacgcccgtctggacggacctt
gagcgccgcaacactgcgctcatgttcatgcccatcgtcgttgatcccgggcccagtccc
aggcgacagcagatggccgagattcacatgctcgactcgatctgcgcagagacggacatg
tcggcactgtgcaaggcgtacttcagcgggccatgcgccccgactagccccaagattgac
gtggctaaactcgaggagaaggtcttcatcctcgtcaactgggccatgggcctgtaccag
atgggcgtccaccggccgtacgccgtatacacgatcctcaagaagtggcagcaatggcaa
gaagagatccgaccgaacgaccatttcgacttcttccccatcttgtaccagtggctcgac
acttcgatcccagcgcgaaaggcggagaatgtcctcccgatcggcatctcctttggcgag
ctcacccgccagggtctcttctcgtatgggcggtacctgaacaggctcatctcgcatgga
cacagctctcgcttcgcaaacggcaagggccccatctcgcaccacattgagctcttgcgt
gtgatgccaattttcgtcgaagcgcccgatctgctcgaacaacgtcgccttgtactcagc
ggcgatggcgagaaccgcgatcgcgagcaggccgaggaagacaatcagctcgaaacgttc
cgccaggagatgaaggagtacgtcccggaagtgttcggtctgcggcgctacggcaagagt
gccttcattcgcgagagtatcgactacgcaatccctatggcagcgggcgtcacacgcttc
gagttcgtccacagccgcttctggttgtatgcggcggccgtccaccacttcaagcggcag
ggctcacagccgccgatggacggcagcacgtacgcacgtgtcatgaacgtcttcatgcag
tgccgcgggtactcgactttggcagacttcctggtcaagggcattaccgccaccgaggac
cccgagattctcctcatcatcctcgactcgataaagcgcgatgctgacgtgtggacgtct
atcgacagatggaaccagatcacatccgcgctcgtggcccgcttccgtgccatgcagagg
cgtggcgggttctgcgctcctctcgtcgctgtcctgcaaatgctcgtgcagcaccaccgc
ctggtcgatccgtccgccgaggccgaggtgctgaacgccagagagcgacatagacgcgcg
tctccagaaactcccgctattgctgtcgacatagaccagagcatggaggggctgcgtcaa
gtcatcaccactggaagtgttgacaaggccatcacgctcgcgtctaagatgttcgctcgg
cacggcaagttcgatctgtggtcggcaacatggtggcagagcgtcatccaagctgtccaa
gccggcgaggcgggcaagccgaacgcggtaaacgctgccgttgcgcacatcagcgaggtc
atcgatctggctggcgacggatctttgcgcccagtgttcgtcacctgggttgcatccctc
acgcccaatacccgggtcgacctgtttggcaggcgctccgtccctcctgtagtccgcatg
ctgctcatgctcatcgtcaagcgcatcctcggctctcacacgctcctcgagcaggtgctc
ttccctgagctgaagcacgctgcttccctcgtctcgggaccgcacccgcgactatccaga
aaacgtacgtacgccgtcgagtgggcggtcacactcgcgcagcagctcctcctgtgcacg
cctcacaggagcctcccacctgtaagcctacgcgaggcgtacgtcgtccagaccgcgcgc
gcggctgcgttccacgcgtcaaatgttgcgaacctcattcagcacctccccgtcttcgtc
gtccttgagcggtccaaactcgtgcccgagaagacgcgcaaccagatcggtgtcatcttc
cgcggtctcgcggagctgccgcagttcaagacggccgcgttccgcaacctcgacgtgcta
aaggacgcgttcttatccaacgactggatcaagcgttcaaacgactcgtctttggagact
ggtatggtagaaggtttaaagcttatgatgtcggacaagcgttccaaaggttcggagggt
ctccctacgctcgagggtggcggaaagtacagcgcctggcggtacacacgcattgtgctc
gagatgcgggtcgagttcaaacgcctcacaatgcgcatcgcgaacaacgaggagccgcac
gaggcgcggaagcagctctcgcagattgtcaagcagtcactggaccgtgaggcaacaccg
gacgacatggacctgctcgtcgaggcgttcaggggtgccgactcggtcgtggcccaggag
atcttgggtgttgggctcgagcggcttggtgacctcttgcaacgcttgcttgctgccgag
gatcagcaccacgtcgaggaggcagcaagtgccgtcgacctcgtcttacgcgtcatcagc
agcatcggacgccaggagaagctcgaagcggccgctgcggtcgcacgcgatcgtctcttc
aacctgctcacggacgcattccagtcgcttgagagacatgtctcgaatgaggacgacgtg
cacatgttacctggcgctacaccacccgaaccaggagagatcatcaaggtggttcttaac
ctcctccgcttcgtcctctcgatcccatcgactgaggttcacgtcccgtcgtcgccgaag
ccggactttagctcgctcgttgtggcgttcttgcatctgggagtggcgctctgtgcccgt
tcacaggggtacactgacatggaatccatgcgtgatctcctgatcttcctggtcgactcg
attccacccaacagccaggccgccgtgcatcacactcttgtcttcgaagcatccacacct
gctgtgcaagatctgctggcccgatcgccgtcgttcgccggcgcccttcctccacccaag
accgactaccgcgccatgtctctatgcggctcctctggtcttatggacagcgacatgggg
atcgccttggatgacagaccgtgggagatgattgagcagatggtcgaccaaacgccactc
aagcactgcgacatgttcttgacttccaagccgctgaaggacacgtcgtcgatcccaatt
gccctattcaagccgcaggtcacgcgcgacgaggtacctgacgctgcacgcgagggtgaa
catccatggaactacgcgtcgtccgagcgcaacctgggcaacggctttggtggcgagccc
attgcggcacgccaagccgcaacagtcctgtacgcgcgcggggatggcaacgttggcgac
cagccaacgctcgccatgccgccgacgccagccagagttaaacggctcaacccacgcaac
aacacgcctgtcaagggtgctggaaccaacaacgaccccatttcaattgaatcggacgaa
agcgaaggagaatcagtggaggagcaacggcccgccagcaagcgccctcgcactggttcc
aagacgtctactggagcgacgcgtcaggtaactggcggcaaggcaccgcgcaaggccgcg
ccagcgcgcaaagcgcctgccaagaacgtacggagcacgtcgggcaaggaagcgaaaggg
cggcgcaagagtggacaggactag
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